RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 TOP1MTQ969P6 601 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 DHRS1Q96LJ7 313 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 COG8Q96MW5 612 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 C17orf80Q9BSJ5 609 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 TRMOQ9BU70 441 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 ZYG11BQ9C0D3 744 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 CEP44Q9C0F1 390 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 AGPAT4Q9NRZ5 378 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 IFT80Q9P2H3 777 aaPredicted RBP15.15■□□□□ 0.02
UPF1-204ENST00000596842 RABL2AQ9UBK7 228 aaPredicted RBP15.15■□□□□ 0.02
UPF1-204ENST00000596842 TOR1BO14657 336 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 FFAR3O14843 346 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 GPR42O15529 346 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 ECI2O75521 394 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 MAPK11Q15759 364 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 FSCN1Q16658 493 aaKnown RBP15.15■□□□□ 0.02
UPF1-204ENST00000596842 PYCR3Q53H96 274 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 XKR4Q5GH76 650 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 BRMS1LQ5PSV4 323 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 SIDT2Q8NBJ9 832 aaKnown RBP15.15■□□□□ 0.02
UPF1-204ENST00000596842 NPLQ9BXD5 320 aaPredicted RBP15.15■□□□□ 0.02
UPF1-204ENST00000596842 RPF2Q9H7B2 306 aaKnown RBP15.15■□□□□ 0.02
UPF1-204ENST00000596842 ACTR3BQ9P1U1 418 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 NOD1Q9Y239 953 aa15.15■□□□□ 0.02
UPF1-204ENST00000596842 DLGAP1O14490 977 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 SLC7A4O43246 635 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 OR1I1O60431 355 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 SLC22A3O75751 556 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 C1RP00736 705 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 HMOX2P30519 316 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 OR1G1P47890 313 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 POLD2P49005 469 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 ATP6V0D1P61421 351 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 NR6A1Q15406 480 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 INAQ16352 499 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 ATP6AP1LQ52LC2 224 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 TMTC4Q5T4D3 741 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 IL27RAQ6UWB1 636 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 LIMS2Q7Z4I7 341 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 DPF3Q92784 378 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 ADAM2Q99965 735 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 IKZF3Q9UKT9 509 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 PADI4Q9UM07 663 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 CNPP09543 421 aaKnown RBP15.14■□□□□ 0.01
UPF1-204ENST00000596842 MRPS6P82932 125 aaKnown RBP15.14■□□□□ 0.01
UPF1-204ENST00000596842 ANKRD34AQ69YU3 496 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 FBXL22Q6P050 247 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 BORAQ6PGQ7 559 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 TMC5Q6UXY8 1006 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 FAM126BQ8IXS8 530 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 PGBD5Q8N414 524 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 CLHC1Q8NHS4 586 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 HPS1Q92902 700 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 BIRC7Q96CA5 298 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 SEPT5Q99719 369 aaPredicted RBP15.14■□□□□ 0.01
UPF1-204ENST00000596842 ACBD6Q9BR61 282 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 OSBPL10Q9BXB5 764 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 ABCG8Q9H221 673 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 ZNF229Q9UJW7 825 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 NEU3Q9UQ49 428 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 A0A0D9SEW6 157 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 KANSL1LA0AUZ9 987 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 IQCA1LA6NCM1 817 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 MUSKO15146 869 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 LDB2O43679 373 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 ALDH4A1P30038 563 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 ACADVLP49748 655 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 CPT1AP50416 773 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 C9orf131Q5VYM1 1079 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 NANOGP8Q6NSW7 305 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 DCP1BQ8IZD4 617 aaKnown RBP15.14■□□□□ 0.01
UPF1-204ENST00000596842 OR7D4Q8NG98 312 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 OR52B6Q8NGF0 335 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 STAG3L4Q8TBR4 150 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 SERPINB11Q96P15 392 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 MFSD1Q9H3U5 465 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 NANOGQ9H9S0 305 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 SMURF2Q9HAU4 748 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 ZFP14Q9HCL3 533 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 TAS2R13Q9NYV9 303 aa15.14■□□□□ 0.01
UPF1-204ENST00000596842 GOLGA4Q13439 2230 aaKnown RBP15.14■□□□□ 0.01
UPF1-204ENST00000596842 GPR182O15218 404 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 MTHFD2P13995 350 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 IDO1P14902 403 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 PRKACGP22612 351 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 CAPGP40121 348 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 POLR2JP52435 117 aaKnown RBP15.13■□□□□ 0.01
UPF1-204ENST00000596842 RAD51Q06609 339 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 LCP2Q13094 533 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 SMYD5Q6GMV2 418 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 GALNT18Q6P9A2 607 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 PRR23CQ6ZRP0 262 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 LYSMD3Q7Z3D4 306 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 LPCAT1Q8NF37 534 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 METTL6Q8TCB7 284 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 SDCCAG3Q96C92 435 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 APOL5Q9BWW9 433 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 PCDH12Q9NPG4 1184 aa15.13■□□□□ 0.01
UPF1-204ENST00000596842 DDX28Q9NUL7 540 aaKnown RBP15.13■□□□□ 0.01
UPF1-204ENST00000596842 ARMC1Q9NVT9 282 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms