RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 KLHDC7BQ96G42 594 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 BMFQ96LC9 184 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 SLC6A18Q96N87 628 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 MYOCQ99972 504 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 TSSK1BQ9BXA7 367 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 CLPBQ9H078 707 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 MIR1-1HGQ9H1L0 117 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 EPB41L4BQ9H329 900 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A7Q9HAW7 530 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A10Q9HAW8 530 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A8Q9HAW9 530 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 GPR27Q9NS67 375 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 IL1RAPL1Q9NZN1 696 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 MARCH4Q9P2E8 410 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 CNOT6Q9ULM6 557 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 KLHL33A6NCF5 533 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 POM121BA6NF01 834 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 DLL1O00548 723 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 PRMT5O14744 637 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 TNFRSF10CO14798 259 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 INPP4BO15327 924 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 ESR1P03372 595 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 INHBAP08476 426 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 GSTM1P09488 218 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 RPS3P23396 243 aaKnown RBP eCLIP16.79■□□□□ 0.282e-7■□□□□ 10.7
SCAMP4-211ENST00000588907 CNTFP26441 200 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 GP5P40197 560 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 CD151P48509 253 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 GSTM4Q03013 218 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 UAP1Q16222 522 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 GRTP1Q5TC63 336 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 PRR23BQ6ZRT6 265 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 Q6ZSR6 202 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 UNC5BQ8IZJ1 945 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 PPM1NQ8N819 430 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 C1orf216Q8TAB5 229 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 FUBP1Q96AE4 644 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 WDR92Q96MX6 357 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 CCDC68Q9H2F9 335 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 FAM96AQ9H5X1 160 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 TM9SF3Q9HD45 589 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 SLC24A2Q9UI40 661 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 GNPTGQ9UJJ9 305 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 ZNF180Q9UJW8 692 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 PILRBQ9UKJ0 227 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 OR1A2Q9Y585 309 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 PCDHGA5Q9Y5G8 931 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 DOCK9Q9BZ29 2069 aa16.79■□□□□ 0.28
SCAMP4-211ENST00000588907 PLXNB3Q9ULL4 1909 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 TNRC6BQ9UPQ9 1833 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 VILLO15195 856 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 TCEA3O75764 348 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 S1PR4O95977 384 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 C1QAP02745 245 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 THEGLP0DJG4 465 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 ATP1B2P14415 290 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 ITPKAP23677 461 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 MSH2P43246 934 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 SERPINB9P50453 376 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 CLDN2P57739 230 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 IFFO1Q0D2I5 559 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 TMEM115Q12893 351 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 CTBP1Q13363 440 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 LGSNQ5TDP6 509 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 ARMCX6Q7L4S7 300 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 STRA8Q7Z7C7 330 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 DENND6AQ8IWF6 608 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 PELI3Q8N2H9 469 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 SLC44A1Q8WWI5 657 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 LPGAT1Q92604 370 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 RHOJQ9H4E5 214 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 TMPRSS11EQ9UL52 423 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 GPR34Q9UPC5 381 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 SLC17A4Q9Y2C5 497 aa16.78■□□□□ 0.28
SCAMP4-211ENST00000588907 A0A1W2PR77 199 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 UBA6A0AVT1 1052 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 GPR39O43194 453 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 CDK14O94921 469 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 ASMTLO95671 621 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 OR56A5P0C7T3 313 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 SPRP35270 261 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 POLD2P49005 469 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 CDKN1CP49918 316 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 BLKP51451 505 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 C21orf59P57076 290 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 PDE1CQ14123 709 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 SEMA3AQ14563 771 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 RASA2Q15283 850 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 PARGQ86W56 976 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 RIBC1Q8N443 379 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 OR13H1Q8NG92 308 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 OR56A4Q8NGH8 313 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 PANX3Q96QZ0 392 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 PAFAH2Q99487 392 aa16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 ROPN1BQ9BZX4 212 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 ROPN1Q9HAT0 212 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 DNMT3AQ9Y6K1 912 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-211ENST00000588907 SPTY2D1-AS1A0A0U1RR47 76 aa16.76■□□□□ 0.27
SCAMP4-211ENST00000588907 CXorf49A8MYA2 514 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-211ENST00000588907 H0Y8X5 98 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms