RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 NXPE1Q8N323 547 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 FSTL5Q8N475 847 aaPredicted RBP15.36■□□□□ 0.05
GHDC-209ENST00000588762 ZNF548Q8NEK5 533 aaPredicted RBP15.36■□□□□ 0.05
GHDC-209ENST00000588762 OR4L1Q8NH43 312 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 SETD7Q8WTS6 366 aaKnown RBP15.36■□□□□ 0.05
GHDC-209ENST00000588762 HEXDCQ8WVB3 486 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 DCUN1D1Q96GG9 259 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 SCARF2Q96GP6 870 aaPredicted RBP15.36■□□□□ 0.05
GHDC-209ENST00000588762 SIGLEC10Q96LC7 697 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 TTC1Q99614 292 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 NAT9Q9BTE0 207 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 TCEAL2Q9H3H9 227 aaPredicted RBP15.36■□□□□ 0.05
GHDC-209ENST00000588762 TREX1Q9NSU2 369 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 ATXN10Q9UBB4 475 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 DOLKQ9UPQ8 538 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 GPSM3Q9Y4H4 160 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 CSNK1G3Q9Y6M4 447 aa15.36■□□□□ 0.05
GHDC-209ENST00000588762 DMXL1Q9Y485 3027 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 AGAP14A8MT82 685 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 SCAMP1O15126 338 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 NUAK1O60285 661 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 MTX2O75431 263 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 POLBP06746 335 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 ALPPL2P10696 532 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 CD59P13987 128 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 ZNF8P17098 575 aaPredicted RBP15.35■□□□□ 0.05
GHDC-209ENST00000588762 GRK6P43250 576 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 GUCY2DQ02846 1103 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 DHX9Q08211 1270 aaKnown RBP15.35■□□□□ 0.05
GHDC-209ENST00000588762 TMEM115Q12893 351 aaPredicted RBP15.35■□□□□ 0.05
GHDC-209ENST00000588762 C1orf61Q13536 156 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 ANKRD20A4Q4UJ75 823 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 FASTKD1Q53R41 847 aaKnown RBP15.35■□□□□ 0.05
GHDC-209ENST00000588762 LYPLAL1Q5VWZ2 237 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 KCTD16Q68DU8 428 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 CES3Q6UWW8 571 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 SDR16C5Q8N3Y7 309 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 SCG3Q8WXD2 468 aaKnown RBP15.35■□□□□ 0.05
GHDC-209ENST00000588762 ZNF669Q96BR6 464 aaPredicted RBP15.35■□□□□ 0.05
GHDC-209ENST00000588762 LRRC39Q96DD0 335 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 MFSD3Q96ES6 412 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 OR2M4Q96R27 311 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 COPS8Q99627 209 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 LRRC61Q9BV99 259 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 L2HGDHQ9H9P8 463 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 CATSPERZQ9NTU4 200 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 UCKL1Q9NWZ5 548 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 TRNAU1APQ9NX07 287 aaKnown RBP15.35■□□□□ 0.05
GHDC-209ENST00000588762 GRHL1Q9NZI5 618 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 RPS6KL1Q9Y6S9 549 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 CEP250Q9BV73 2442 aa15.35■□□□□ 0.05
GHDC-209ENST00000588762 ARID1BQ8NFD5 2236 aaPredicted RBP15.35■□□□□ 0.05
GHDC-209ENST00000588762 ARHGEF17Q96PE2 2063 aaPredicted RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 TRBV5-4A0A0C4DH59 114 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 OR51F1A6NGY5 319 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 CFAP99D6REC4 459 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 SLC30A4O14863 429 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 TP73O15350 636 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 FFAR2O15552 330 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 GRID2O43424 1007 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 DNAJC6O75061 913 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 VAPBO95292 243 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 FUCA1P04066 466 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 ANXA6P08133 673 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 PGAM1P18669 254 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 FOXN2P32314 431 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 PPARGP37231 505 aaPredicted RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 CDKN1CP49918 316 aaPredicted RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 PLTPP55058 493 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 ILF3Q12906 894 aaKnown RBP eCLIP15.34■□□□□ 0.05
GHDC-209ENST00000588762 RSPO4Q2I0M5 234 aaPredicted RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 MSS51Q4VC12 460 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 KHDC1Q4VXA5 237 aaKnown RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 PYCR3Q53H96 274 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 AARS2Q5JTZ9 985 aaKnown RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 KIAA0930Q6ICG6 404 aaPredicted RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 CERS6Q6ZMG9 384 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 DBX2Q6ZNG2 339 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 CENPUQ71F23 418 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 KANSL1Q7Z3B3 1105 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 SERPINA9Q86WD7 417 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 GKN2Q86XP6 184 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 CCNJLQ8IV13 435 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 NAXDQ8IW45 347 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 SLC25A45Q8N413 288 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 OTUD6BQ8N6M0 293 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 RHBDD1Q8TEB9 315 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 ART4Q93070 314 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 ZNF514Q96K75 400 aaPredicted RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 EBNA1BP2Q99848 306 aaKnown RBP15.34■□□□□ 0.05
GHDC-209ENST00000588762 TMEM168Q9H0V1 697 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 EPB41L5Q9HCM4 733 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 FAM114A2Q9NRY5 505 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 ZDHHC3Q9NYG2 299 aa15.34■□□□□ 0.05
GHDC-209ENST00000588762 CFAP54Q96N23 3096 aa15.33■□□□□ 0.05
GHDC-209ENST00000588762 LMO7DNF2Z398 122 aa15.33■□□□□ 0.04
GHDC-209ENST00000588762 CHUKO15111 745 aa15.33■□□□□ 0.04
GHDC-209ENST00000588762 KMOO15229 486 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms