RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TRIM39Q9HCM9 518 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 RXFP3Q9NSD7 469 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 SEMA4GQ9NTN9 838 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 CATSPERZQ9NTU4 200 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 MTRF1LQ9UGC7 380 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 MOSPD1Q9UJG1 213 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 SLC17A4Q9Y2C5 497 aa10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 TDRD6O60522 2096 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-213ENST00000587988 CACNA1EQ15878 2313 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 KNL1Q8NG31 2342 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 LNP1A1A4G5 178 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 PRSS38A1L453 326 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 CD3EAPO15446 510 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 DNAJC6O75061 913 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 TTC4O95801 387 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 ERVK-10P10266 1014 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 ZNF8P17098 575 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 PAMP19021 973 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 HTR1BP28222 390 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 CTSCP53634 463 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 SRP54P61011 504 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 VSNL1P62760 191 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 TUBB4BP68371 445 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 TMEM115Q12893 351 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 SHBQ15464 509 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 CSRP2Q16527 193 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 LONRF1Q17RB8 773 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 HSP90AA5PQ58FG0 334 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 LDLRAP1Q5SW96 308 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 NEPROQ6NW34 567 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 RD3Q7Z3Z2 195 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 KCNMB4Q86W47 210 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 PARGQ86W56 976 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 HID1Q8IV36 788 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 PALM2Q8IXS6 379 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 RBFAQ8N0V3 343 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 DDHD1Q8NEL9 900 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 ULK4Q96C45 1275 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 SCARF2Q96GP6 870 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 BOCQ9BWV1 1114 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 GAREM1Q9H706 876 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 LRRC4CQ9HCJ2 640 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 CYP4F12Q9HCS2 524 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 IARS2Q9NSE4 1012 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 C20orf96Q9NUD7 363 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 DNAJC28Q9NX36 388 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 ZDHHC3Q9NYG2 299 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 KLQ9UEF7 1012 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 SUFUQ9UMX1 484 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 PRKAB1Q9Y478 270 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 PRSS21Q9Y6M0 314 aa10.59□□□□□ -0.71
SMARCA4-213ENST00000587988 IGLV3-16A0A075B6K0 115 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 TNFRSF10CO14798 259 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 SGTAO43765 313 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 NUAK1O60285 661 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 OR1I1O60431 355 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 LRP3O75074 770 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 CDK14O94921 469 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 CSF2P04141 144 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 SYPP08247 313 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 JUNDP17535 347 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 MSH3P20585 1137 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 KELP23276 732 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 TNFRSF8P28908 595 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 HK3P52790 923 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 IL9RQ01113 521 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 PPARDQ03181 441 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 BNIP3Q12983 259 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 CTBP1Q13363 440 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 THOC5Q13769 683 aaKnown RBP10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 TCEA2Q15560 299 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 KYNUQ16719 465 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF423Q2M1K9 1284 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 ZNF789Q5FWF6 425 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 CCNI2Q6ZMN8 369 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 PRR23CQ6ZRP0 262 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 C3orf62Q6ZUJ4 267 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 DET1Q7L5Y6 550 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 CILP2Q8IUL8 1156 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 RELL1Q8IUW5 271 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 DENND6AQ8IWF6 608 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 PHACTR4Q8IZ21 702 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 OTUD6BQ8N6M0 293 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 RASGEF1AQ8N9B8 481 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 GPR150Q8NGU9 434 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 GSDMBQ8TAX9 411 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 SGF29Q96ES7 293 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 CERS2Q96G23 380 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 ELF4Q99607 663 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 GTPBP2Q9BX10 602 aaKnown RBP10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 PARD6BQ9BYG5 372 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 CDC42EP4Q9H3Q1 356 aaKnown RBP10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 ERVMER34-1Q9H9K5 563 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 CARS2Q9HA77 564 aaKnown RBP10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 SMYD2Q9NRG4 433 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 MOCS1Q9NZB8 636 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 NINJ2Q9NZG7 142 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 VPS18Q9P253 973 aa10.58□□□□□ -0.72
SMARCA4-213ENST00000587988 SLC17A6Q9P2U8 582 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms