RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ADCY2Q08462 1091 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 WASHC5Q12768 1159 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 PRKD1Q15139 912 aaPredicted RBP14.16□□□□□ -0.14
VMP1-206ENST00000587945 KHDC1Q4VXA5 237 aaKnown RBP14.16□□□□□ -0.14
VMP1-206ENST00000587945 ANKS6Q68DC2 871 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 SLC9B2Q86UD5 537 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 PHYKPLQ8IUZ5 450 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 TRAM1L1Q8N609 369 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 ZSCAN1Q8NBB4 408 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 CCDC112Q8NEF3 446 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 NKD1Q969G9 470 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 TEKT5Q96M29 485 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 CTRCQ99895 268 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 ZSCAN5AQ9BUG6 496 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 STN1Q9H668 368 aaKnown RBP14.16□□□□□ -0.14
VMP1-206ENST00000587945 CPNE7Q9UBL6 633 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 TMPRSS11EQ9UL52 423 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 TFR2Q9UP52 801 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 DNAJC16Q9Y2G8 782 aa14.16□□□□□ -0.14
VMP1-206ENST00000587945 KIR2DS5A0A0G2JLQ3 304 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 A0A0G2JNG1 304 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 B4E171 279 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 J3QKU1 62 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 KIR2DS3K7RE56 304 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 FAM87AP0C7U9 286 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 TSPAN7P41732 249 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 ATP1A2P50993 1020 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 UBE2IP63279 158 aaKnown RBP14.15□□□□□ -0.14
VMP1-206ENST00000587945 NFATC3Q12968 1075 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 TBX2Q13207 712 aaPredicted RBP14.15□□□□□ -0.14
VMP1-206ENST00000587945 KIR2DS5Q14953 304 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 TCEAL1Q15170 157 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 SEPT7Q16181 437 aaKnown RBP14.15□□□□□ -0.14
VMP1-206ENST00000587945 TAZQ16635 292 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 TBR1Q16650 682 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 CCDC70Q6NSX1 233 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 WDR74Q6RFH5 385 aaPredicted RBP14.15□□□□□ -0.14
VMP1-206ENST00000587945 SPOCD1Q6ZMY3 1216 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 ARHGAP22Q7Z5H3 698 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 CNGA4Q8IV77 575 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 SLC25A41Q8N5S1 370 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 IL22RA1Q8N6P7 574 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 BMPERQ8N8U9 685 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 TFB1MQ8WVM0 346 aaKnown RBP14.15□□□□□ -0.14
VMP1-206ENST00000587945 SH3KBP1Q96B97 665 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 HAUS1Q96CS2 278 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 PLEKHG4BQ96PX9 1271 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 ARHGAP9Q9BRR9 750 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 DDA1Q9BW61 102 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 INTUQ9ULD6 942 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 ALG6Q9Y672 507 aa14.15□□□□□ -0.14
VMP1-206ENST00000587945 CHUKO15111 745 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 RAD1O60671 282 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 ITGB2P05107 769 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 SLC2A4P14672 509 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 LIFP15018 202 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 TYRP1P17643 537 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 NFKB1P19838 968 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 MAGEA1P43355 309 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 CHRNA4P43681 627 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 MARCKSL1P49006 195 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 NR2C2P49116 596 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 CLCNKAP51800 687 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 WNT3AP56704 352 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 TFDP2Q14188 446 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 SLC14A2Q15849 920 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 INSCQ1MX18 579 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 ATP13A5Q4VNC0 1218 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 DCAF12Q5T6F0 453 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 KDELC1Q6UW63 502 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 ZC3H18Q86VM9 953 aaKnown RBP14.14□□□□□ -0.15
VMP1-206ENST00000587945 ZNF547Q8IVP9 402 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 CACNA2D3Q8IZS8 1091 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 RTP4Q96DX8 246 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 RNF31Q96EP0 1072 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 ASPSCR1Q9BZE9 553 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 APMAPQ9HDC9 416 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 RAD18Q9NS91 495 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 OGFRQ9NZT2 677 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 NFKBIL1Q9UBC1 381 aaPredicted RBP14.14□□□□□ -0.15
VMP1-206ENST00000587945 FAM153AQ9UHL3 310 aa14.14□□□□□ -0.15
VMP1-206ENST00000587945 LOC285095A0A1B0GVY8 99 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 OR5K4A6NMS3 321 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 PDZK1P1A8MUH7 402 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 KMOO15229 486 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 PSTPIP1O43586 416 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 CDK14O94921 469 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 ZNF7P17097 686 aaPredicted RBP14.13□□□□□ -0.15
VMP1-206ENST00000587945 RPL10P27635 214 aaKnown RBP14.13□□□□□ -0.15
VMP1-206ENST00000587945 SLC19A1P41440 591 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 EPHA4P54764 986 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 GFERP55789 205 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 RAB15P59190 212 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 NFKB2Q00653 900 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 MC2RQ01718 297 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 CLCA4Q14CN2 919 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 SIRPB2Q5JXA9 342 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 PDPK2PQ6A1A2 396 aa14.13□□□□□ -0.15
VMP1-206ENST00000587945 BZW1Q7L1Q6 419 aaKnown RBP14.13□□□□□ -0.15
VMP1-206ENST00000587945 LRRTM4Q86VH4 590 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms