RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 OR5K4A6NMS3 321 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 CHUKO15111 745 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 UBXN7O94888 489 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 FGF5P12034 268 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 XRCC1P18887 633 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-225ENST00000586385 CDK11BP21127 795 aaKnown RBP11.71□□□□□ -0.53
BRCA1-225ENST00000586385 RPL26P61254 145 aaKnown RBP11.71□□□□□ -0.53
BRCA1-225ENST00000586385 PPP1CAP62136 330 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 LAMB3Q13751 1172 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 SEPT6Q14141 434 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 DPYSL3Q14195 570 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 C4orf17Q53FE4 359 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 CAPRIN2Q6IMN6 1127 aaKnown RBP11.71□□□□□ -0.53
BRCA1-225ENST00000586385 ZNF547Q8IVP9 402 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 NDUFAF2Q8N183 169 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 PQLC3Q8N755 202 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 CNTD1Q8N815 330 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 GPR26Q8NDV2 337 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 CT55Q8WUE5 264 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 KLHL6Q8WZ60 621 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 FATE1Q969F0 183 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 ELMO2Q96JJ3 720 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 TGM7Q96PF1 710 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 STN1Q9H668 368 aaKnown RBP11.71□□□□□ -0.53
BRCA1-225ENST00000586385 KLC4Q9NSK0 619 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 ANO10Q9NW15 660 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 RCOR3Q9P2K3 495 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-225ENST00000586385 DNPEPQ9ULA0 475 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 RPL26L1Q9UNX3 145 aaKnown RBP11.71□□□□□ -0.53
BRCA1-225ENST00000586385 POLHQ9Y253 713 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 PCDHGA6Q9Y5G7 932 aa11.71□□□□□ -0.53
BRCA1-225ENST00000586385 CDC14CA4D256 554 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 MKRN2OSH3BPM6 223 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 MTX2O75431 263 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 KATNA1O75449 491 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 SPAG6O75602 509 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 CREG1O75629 220 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 RFPL1O75677 317 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 NDUFA10O95299 355 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 MYBL1P10243 752 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 SLC2A4P14672 509 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 GNLYP22749 145 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 CCNCP24863 283 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 ZNF165P49910 485 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 GBE1Q04446 702 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 KLHL30Q0D2K2 578 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 DNASE1L3Q13609 305 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 PIGHQ14442 188 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-225ENST00000586385 IL11RAQ14626 422 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 PLA2G4EQ3MJ16 856 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 HGSNATQ68CP4 663 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 CRTC3Q6UUV7 619 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 PRSS42Q7Z5A4 293 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 PHYKPLQ8IUZ5 450 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 TEX19Q8NA77 164 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 TRIB3Q96RU7 358 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 THAP2Q9H0W7 228 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 OSGEPL1Q9H4B0 414 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 MRPL47Q9HD33 250 aaKnown RBP11.7□□□□□ -0.54
BRCA1-225ENST00000586385 SEMA5BQ9P283 1151 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 TTLL3Q9Y4R7 772 aa11.7□□□□□ -0.54
BRCA1-225ENST00000586385 RGSL1A5PLK6 1076 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 OR52A4PA6NMU1 304 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 ANKRD66B4E2M5 251 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 TOX3O15405 576 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 SEMA7AO75326 666 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 PIRTP0C851 137 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 ZNF7P17097 686 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 CES1P23141 567 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 CD86P42081 329 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 CAPZBP47756 277 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 ZBTB17Q13105 803 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 SEMA5AQ13591 1074 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 GPR18Q14330 331 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 GALNT3Q14435 633 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 KRT81Q14533 505 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 SEPT7Q16181 437 aaKnown RBP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 STX1AQ16623 288 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 IFI16Q16666 785 aaKnown RBP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 ANKRD20A8PQ5CZ79 823 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 CCDC183Q5T5S1 534 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 ALS2CLQ60I27 953 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 CPZQ66K79 652 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 ABRAXAS1Q6UWZ7 409 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 CERS6Q6ZMG9 384 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 C11orf96Q7Z7L8 435 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 ATCAYQ86WG3 371 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 APLFQ8IW19 511 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 AVL9Q8NBF6 648 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 FAF2Q96CS3 445 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 STAMBPL1Q96FJ0 436 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 NAP1L5Q96NT1 182 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 MLPHQ9BV36 600 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 TWSG1Q9GZX9 223 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 LRRC4CQ9HCJ2 640 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 TRIM39Q9HCM9 518 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 SLC40A1Q9NP59 571 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms