RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PDCD7Q8N8D1 485 aaKnown RBP8.56□□□□□ -1.04
ATG4D-202ENST00000585437 IPMKQ8NFU5 416 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 OR6C4Q8NGE1 309 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 WDR48Q8TAF3 677 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 GRK7Q8WTQ7 553 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 SCG3Q8WXD2 468 aaKnown RBP8.56□□□□□ -1.04
ATG4D-202ENST00000585437 ZCCHC14Q8WYQ9 949 aaKnown RBP8.56□□□□□ -1.04
ATG4D-202ENST00000585437 SEC14L1Q92503 715 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 PPP1R2P1Q96PQ5 205 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 C19orf43Q9BQ61 176 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 FERMT1Q9BQL6 677 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 NRSN2Q9GZP1 204 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 DDX47Q9H0S4 455 aaKnown RBP8.56□□□□□ -1.04
ATG4D-202ENST00000585437 ARNT2Q9HBZ2 717 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 HACD3Q9P035 362 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 IL17CQ9P0M4 197 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 PCYOX1Q9UHG3 505 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 FEZ2Q9UHY8 353 aaPredicted RBP8.56□□□□□ -1.04
ATG4D-202ENST00000585437 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 PADI4Q9UM07 663 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 GPR34Q9UPC5 381 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 NBEAQ8NFP9 2946 aa8.56□□□□□ -1.04
ATG4D-202ENST00000585437 APC2O95996 2303 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GOLGA6CA6NDK9 693 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 PRR19A6NJB7 356 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GPR89AB7ZAQ6 455 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 BHMG1C9JSJ3 638 aaPredicted RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GOLGA8KD6RF30 607 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 F5H423 210 aaPredicted RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 NTN3O00634 580 aaPredicted RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 CHUKO15111 745 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 CASC3O15234 703 aaKnown RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 INPP4BO15327 924 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 NUDT21O43809 227 aaKnown RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 MT-CO3P00414 261 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GPR89BP0CG08 455 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GOLGA6DP0CG33 693 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GLB1P16278 677 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GNPDA1P46926 289 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 DRG2P55039 364 aaKnown RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 CTBSQ01459 385 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 ILF3Q12906 894 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 TARDBPQ13148 414 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 SIX1Q15475 284 aaPredicted RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 TCEA2Q15560 299 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 C14orf28Q4W4Y0 310 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 DENND5AQ6IQ26 1287 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 DARS2Q6PI48 645 aaKnown RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 DOK6Q6PKX4 331 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GLT6D1Q7Z4J2 308 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 TAF8Q7Z7C8 310 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GSPT2Q8IYD1 628 aaKnown RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 NAGSQ8N159 534 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 CCDC110Q8TBZ0 833 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 IFT81Q8WYA0 676 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GLYATL1Q969I3 302 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 CCDC74AQ96AQ1 378 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 NXPE2Q96DL1 559 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 DEPDC7Q96QD5 511 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 OR2M4Q96R27 311 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 CCDC3Q9BQI4 270 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 FSD1LQ9BXM9 530 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GSDMCQ9BYG8 508 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 FRMD8P1Q9BZ68 369 aaPredicted RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GPR63Q9BZJ6 419 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 RMI1Q9H9A7 625 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 SPATS2LQ9NUQ6 558 aaKnown RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 GOLGA6AQ9NYA3 693 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 APPL1Q9UKG1 709 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 TMPRSS11EQ9UL52 423 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 ZMIZ1Q9ULJ6 1067 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 NFU1Q9UMS0 254 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 DOLKQ9UPQ8 538 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 TMEM98Q9Y2Y6 226 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 AAR2Q9Y312 384 aaKnown RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 CACNA1BQ00975 2339 aa8.55□□□□□ -1.04
ATG4D-202ENST00000585437 SMG1Q96Q15 3661 aaKnown RBP8.55□□□□□ -1.04
ATG4D-202ENST00000585437 ACACAQ13085 2346 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 A0A1W2PQM1 296 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 CPED1A4D0V7 1026 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 A6NCN8 305 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 TRABD2BA6NFA1 517 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 GOLGA6L10A6NI86 522 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 AGAP14A8MT82 685 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 B4DGG1 531 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 D6RAR5 112 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 TAF4O00268 1085 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 NDC80O14777 642 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 TTI1O43156 1089 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 LIASO43766 372 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 NUAK1O60285 661 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 PPFIA2O75334 1257 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 STK10O94804 968 aaKnown RBP8.54□□□□□ -1.04
ATG4D-202ENST00000585437 ECEL1O95672 775 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 GAS8O95995 478 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 JUPP14923 745 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 AK4P27144 223 aaPredicted RBP8.54□□□□□ -1.04
ATG4D-202ENST00000585437 FASLGP48023 281 aa8.54□□□□□ -1.04
ATG4D-202ENST00000585437 CARSP49589 748 aaKnown RBP8.54□□□□□ -1.04
ATG4D-202ENST00000585437 CLCNKAP51800 687 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms