RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 MIIPQ5JXC2 388 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 SMYD5Q6GMV2 418 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 RFX8Q6ZV50 586 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 PRSS42Q7Z5A4 293 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 ZNF677Q86XU0 584 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 SIDT2Q8NBJ9 832 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 C3orf20Q8ND61 904 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 KLHL6Q8WZ60 621 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 SPOCK2Q92563 424 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 MLPHQ9BV36 600 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 GPR87Q9BY21 358 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 VPS18Q9P253 973 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 ZNF624Q9P2J8 865 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 PCDHGB7Q9Y5F8 929 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 PCSK5Q92824 1860 aa13.92□□□□□ -0.18
CSNK1D-224ENST00000584672 MDC1Q14676 2089 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 IGHV5-51A0A0C4DH38 117 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 ANKRD62A6NC57 917 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 SIGLEC16A6NMB1 481 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 OR5K4A6NMS3 321 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 PDZK1P1A8MUH7 402 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 FADS2P1A8MWK0 482 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 TOX3O15405 576 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 LRRTM2O43300 516 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 GRID2O43424 1007 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 NELFEP18615 380 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 CAPZBP47756 277 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 STC1P52823 247 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 OGDHQ02218 1023 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 SP5Q6BEB4 398 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 CRTC3Q6UUV7 619 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 ZNF765Q7L2R6 523 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 PIH1D2Q8WWB5 315 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 PEBP4Q96S96 227 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 CNPY3Q9BT09 278 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 SNRNP25Q9BV90 132 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 STK33Q9BYT3 514 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 CHST8Q9H2A9 424 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 SEPT11Q9NVA2 429 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 PCSK1NQ9UHG2 260 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 CNOT6Q9ULM6 557 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 SNX7Q9UNH6 387 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 DNAJC16Q9Y2G8 782 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 NTNG1Q9Y2I2 539 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 ZFHX3Q15911 3703 aa13.91□□□□□ -0.18
CSNK1D-224ENST00000584672 PRSS44E7EML9 344 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 ZG16O60844 167 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 CLDN7O95471 211 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 CALB1P05937 261 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 UNGP13051 313 aaPredicted RBP13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 HTR7P34969 479 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 PDE1BQ01064 536 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 GPS2Q13227 327 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 GPR18Q14330 331 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 TDRD12Q587J7 1177 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 LCN10Q6JVE6 187 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 ENDOVQ8N8Q3 282 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 AVL9Q8NBF6 648 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 ADAMTS17Q8TE56 1095 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 ZDHHC12Q96GR4 267 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 ZNF599Q96NL3 588 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 WDR24Q96S15 920 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 MGME1Q9BQP7 344 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 ATXN10Q9UBB4 475 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 TRIM10Q9UDY6 481 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 SLC23A2Q9UGH3 650 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 COPG1Q9Y678 874 aaKnown RBP13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 PIKFYVEQ9Y2I7 2098 aa13.9□□□□□ -0.18
CSNK1D-224ENST00000584672 SSU72P8A0A1W2PR75 194 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 OR52A4PA6NMU1 304 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 DDX3YO15523 660 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 PEX11BO96011 259 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 PYGLP06737 847 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 ZNF8P17098 575 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 XRCC1P18887 633 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 LPOP22079 712 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 RPL10P27635 214 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 HSPA9P38646 679 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 KLK7P49862 253 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 EPHB1P54762 984 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 AIF1P55008 147 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 GSCP56915 257 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 ATP1A4Q13733 1029 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 INSCQ1MX18 579 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 CLEC16AQ2KHT3 1053 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 PRAMEF17Q5VTA0 474 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 HGSNATQ68CP4 663 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 TRIM72Q6ZMU5 477 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 MON1BQ7L1V2 547 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 TMEM126BQ8IUX1 230 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 ELOA2Q8IYF1 753 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 INPP5DQ92835 1189 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 TUBGCP2Q9BSJ2 902 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 ILKAPQ9H0C8 392 aaPredicted RBP13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 OR2AG1Q9H205 316 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 UCK1Q9HA47 277 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 NT5MQ9NPB1 228 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 NLRC4Q9NPP4 1024 aa13.89□□□□□ -0.19
CSNK1D-224ENST00000584672 FGF21Q9NSA1 209 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms