RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TAAR2Q9P1P5 351 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 CD84Q9UIB8 345 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 SUFUQ9UMX1 484 aa11.05□□□□□ -0.64
CCDC47-206ENST00000584112 KIAA1324LA8MWY0 1029 aaPredicted RBP11.04□□□□□ -0.64
CCDC47-206ENST00000584112 APOL1O14791 398 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 PPP1R12AO14974 1030 aaPredicted RBP11.04□□□□□ -0.64
CCDC47-206ENST00000584112 NKX2-8O15522 239 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 LIFP15018 202 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 SLC1A1P43005 524 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 IFI35P80217 286 aaPredicted RBP11.04□□□□□ -0.64
CCDC47-206ENST00000584112 PTSQ03393 145 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 BIRC2Q13490 618 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 PDK1Q15118 436 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 PTPRRQ15256 657 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 CLPPQ16740 277 aaPredicted RBP11.04□□□□□ -0.64
CCDC47-206ENST00000584112 LRRC38Q5VT99 294 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 SLC9A4Q6AI14 798 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 NRROSQ86YC3 692 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 PLD5Q8N7P1 536 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 Q8N9G6 341 aaPredicted RBP11.04□□□□□ -0.64
CCDC47-206ENST00000584112 LPCAT1Q8NF37 534 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 CCHCR1Q8TD31 782 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 SCARF2Q96GP6 870 aaPredicted RBP11.04□□□□□ -0.64
CCDC47-206ENST00000584112 OR2M4Q96R27 311 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 LYSMD1Q96S90 227 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 ADGRE3Q9BY15 652 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 FOXP3Q9BZS1 431 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 BRD8Q9H0E9 1235 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 SPATS2LQ9NUQ6 558 aaKnown RBP11.04□□□□□ -0.64
CCDC47-206ENST00000584112 DDX56Q9NY93 547 aaKnown RBP11.04□□□□□ -0.64
CCDC47-206ENST00000584112 INTUQ9ULD6 942 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 MAP4K5Q9Y4K4 846 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 HEY1Q9Y5J3 304 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 RNF215Q9Y6U7 377 aa11.04□□□□□ -0.64
CCDC47-206ENST00000584112 C1orf232A0A0U1RR37 186 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 RHPN2P1A8MT19 583 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 AKR1B15C9JRZ8 316 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-206ENST00000584112 KCNK1O00180 336 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 CLDN7O95471 211 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 SOD1P00441 154 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 PRLP01236 227 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 JCHAINP01591 159 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 FUCA1P04066 466 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 KRT1P04264 644 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 FGF1P05230 155 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 JMJD7P0C870 316 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 AK4P27144 223 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-206ENST00000584112 ADCY8P40145 1251 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 CD86P42081 329 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 GPR3P46089 330 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 CTBSQ01459 385 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 NIPAL4Q0D2K0 466 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 AP1B1Q10567 949 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 LRP8Q14114 963 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 IHHQ14623 411 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 MAP9Q49MG5 647 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 DOK6Q6PKX4 331 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 SLC30A9Q6PML9 568 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 BZW1Q7L1Q6 419 aaKnown RBP11.03□□□□□ -0.64
CCDC47-206ENST00000584112 ZNF438Q7Z4V0 828 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 C17orf82Q86X59 251 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-206ENST00000584112 GALNT13Q8IUC8 556 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 RHOT1Q8IXI2 618 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 RNF214Q8ND24 703 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 SPATA3Q8NHX4 192 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 SCAMP4Q969E2 229 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 MLPHQ9BV36 600 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-206ENST00000584112 RIOK2Q9BVS4 552 aaKnown RBP11.03□□□□□ -0.64
CCDC47-206ENST00000584112 GSX1Q9H4S2 264 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-206ENST00000584112 PKD2L2Q9NZM6 624 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 AKAP7Q9P0M2 348 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-206ENST00000584112 SLC5A6Q9Y289 635 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 PIKFYVEQ9Y2I7 2098 aa11.03□□□□□ -0.64
CCDC47-206ENST00000584112 A0A0U1RQS6 177 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 RGSL1A5PLK6 1076 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 C3orf70A6NLC5 250 aaPredicted RBP11.02□□□□□ -0.65
CCDC47-206ENST00000584112 ANKRD66B4E2M5 251 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 SPOPO43791 374 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 ASMTLO95671 621 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 ECEL1O95672 775 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 CPNE6O95741 557 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 MMP2P08253 660 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 ACTR1BP42025 376 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 POLD2P49005 469 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 SPINT3P49223 89 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 MAZP56270 477 aaKnown RBP11.02□□□□□ -0.65
CCDC47-206ENST00000584112 ACTR1AP61163 376 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 B4GALNT1Q00973 533 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 ZFP36L1Q07352 338 aaKnown RBP11.02□□□□□ -0.65
CCDC47-206ENST00000584112 ZBTB17Q13105 803 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 NR1D2Q14995 579 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 TCEAL1Q15170 157 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 SLC14A2Q15849 920 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 QPCTQ16769 361 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 DEFB109BQ30KR1 87 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 RFLNAQ6ZTI6 216 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 ASB18Q6ZVZ8 466 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 NT5DC3Q86UY8 548 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 PIM3Q86V86 326 aa11.02□□□□□ -0.65
CCDC47-206ENST00000584112 RFX6Q8HWS3 928 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms