RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 PMPCBO75439 489 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 AHSGP02765 367 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PABPC4LP0CB38 370 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 NAGAP17050 411 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CKMT2P17540 419 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TUSC3Q13454 348 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZNF423Q2M1K9 1284 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 KRBOX4Q5JUW0 171 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 OVOS1Q6IE37 1185 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LIMS2Q7Z4I7 341 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PSTKQ8IV42 348 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MFSD6LQ8IWD5 586 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RTKNQ9BST9 563 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GLRX2Q9NS18 164 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 EHD3Q9NZN3 535 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 OR12D3Q9UGF7 316 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 STAP1Q9ULZ2 295 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 COPG1Q9Y678 874 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 UNC80Q8N2C7 3258 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 FAM149AA5PLN7 773 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MATN2O00339 956 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TADA2AO75478 443 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 AP2A1O95782 977 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MOCS2O96007 188 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ALDH2P05091 517 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 THRAP10827 490 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ODC1P11926 461 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 IL10P22301 178 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GLDCP23378 1020 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LHX1P48742 406 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 POU3F4P49335 361 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 COG7P83436 770 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TEAD4Q15561 434 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ANO4Q32M45 955 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CDONQ4KMG0 1287 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZNF789Q5FWF6 425 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MTX3Q5HYI7 312 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 OGFRL1Q5TC84 451 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ESRP1Q6NXG1 681 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MYLPFQ96A32 169 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PPWD1Q96BP3 646 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RTP3Q9BQQ7 232 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MVB12BQ9H7P6 319 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 FBRSL1Q9HCM7 1045 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ABI2Q9NYB9 513 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 IGSF9Q9P2J2 1179 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ADGRE2Q9UHX3 823 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SLC8A2Q9UPR5 921 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SORCS3Q9UPU3 1222 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PTGDR2Q9Y5Y4 395 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZNF487B1APH4 448 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZNF623O75123 536 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 APOA4P06727 396 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 KCNA5P22460 613 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MAPK10P53779 464 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SEMA3BQ13214 749 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CSHL1Q14406 222 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SGCAQ16586 387 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 FUT11Q495W5 492 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CLLU1OSQ5K130 101 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RARS2Q5T160 578 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CLEC6AQ6EIG7 209 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TMCO2Q7Z6W1 182 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 OR6P1Q8NGX9 317 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LILRB4Q8NHJ6 448 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 JADE3Q92613 823 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 BCL7BQ9BQE9 202 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 COLEC11Q9BWP8 271 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TRPC7Q9HCX4 862 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 OXSMQ9NWU1 459 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 FBXW11Q9UKB1 542 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LRFN2Q9ULH4 789 aa11.54□□□□□ -0.56
CDK5RAP3-231ENST00000584063 C7orf72A4D263 438 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 C16orf96A6NNT2 1141 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 HHLA1C9JL84 531 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 E7ENX8 843 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TMX2-CTNND1H3BSU7 103 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GABRDO14764 452 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TSC22D2O75157 780 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CLIC3O95833 236 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 EOMESO95936 686 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MLNP12872 115 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ACSL1P33121 698 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GRIK1P39086 918 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GALK1P51570 392 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 YBX1P67809 324 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SLC14A2Q15849 920 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 NDUFAF5Q5TEU4 345 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 USP51Q70EK9 711 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PJA1Q8NG27 643 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 OR10T2Q8NGX3 314 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PMEPA1Q969W9 287 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LRCH3Q96II8 777 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ELMO2Q96JJ3 720 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SLC29A1Q99808 456 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CHCHD6Q9BRQ6 235 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 COQ10BQ9H8M1 238 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZDHHC7Q9NXF8 308 aa11.53□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MPP6Q9NZW5 540 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms