RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 KCNK6Q9Y257 313 aa19.91■□□□□ 0.78
SMG8-204ENST00000580498 REXO2Q9Y3B8 237 aaKnown RBP19.91■□□□□ 0.78
SMG8-204ENST00000580498 F5H423 210 aaPredicted RBP19.9■□□□□ 0.78
SMG8-204ENST00000580498 HGSO14964 777 aaPredicted RBP19.9■□□□□ 0.78
SMG8-204ENST00000580498 STX7O15400 261 aaKnown RBP19.9■□□□□ 0.78
SMG8-204ENST00000580498 F3P13726 295 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 ITPKBP27987 946 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 CLCNKAP51800 687 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 ZFP36L1Q07352 338 aaKnown RBP19.9■□□□□ 0.78
SMG8-204ENST00000580498 LDLRAP1Q5SW96 308 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 ARHGEF18Q6ZSZ5 1173 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 CLEC14AQ86T13 490 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 SFRP1Q8N474 314 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 LRRC57Q8N9N7 239 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 DTX3LQ8TDB6 740 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 SLC37A2Q8TED4 501 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 FCRL3Q96P31 734 aaPredicted RBP19.9■□□□□ 0.78
SMG8-204ENST00000580498 FICDQ9BVA6 458 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 EPB41L1Q9H4G0 881 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 BPIFA1Q9NP55 256 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 SARS2Q9NP81 518 aaKnown RBP19.9■□□□□ 0.78
SMG8-204ENST00000580498 FEZ2Q9UHY8 353 aaPredicted RBP19.9■□□□□ 0.78
SMG8-204ENST00000580498 PRKAB1Q9Y478 270 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 PLEKHM1Q9Y4G2 1056 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 PCDHGA7Q9Y5G6 932 aa19.9■□□□□ 0.78
SMG8-204ENST00000580498 GLYATL1P3A0A0U1RQE8 302 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 CDRT15L2A8MXV6 281 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 KCNJ13O60928 360 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 CRTAMO95727 393 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 ZNF8P17098 575 aaPredicted RBP19.89■□□□□ 0.77
SMG8-204ENST00000580498 CSTF2P33240 577 aaKnown RBP eCLIP19.89■□□□□ 0.77
SMG8-204ENST00000580498 TLE3Q04726 772 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 ANKRD20A2Q5SQ80 823 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 SEL1L2Q5TEA6 688 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 ANKRD20A1Q5TYW2 823 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 ANKRD20A3Q5VUR7 823 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 CRTC3Q6UUV7 619 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 USP53Q70EK8 1073 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 GPR155Q7Z3F1 870 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 TRAPPC5Q8IUR0 188 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 SFTPA2Q8IWL1 248 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 OR4D9Q8NGE8 314 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 PATE1Q8WXA2 126 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 EID2BQ96D98 161 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 OXNAD1Q96HP4 312 aaPredicted RBP19.89■□□□□ 0.77
SMG8-204ENST00000580498 SPATA13Q96N96 652 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 TIMM29Q9BSF4 260 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 DESI2Q9BSY9 194 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 RDH14Q9HBH5 336 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 KLC4Q9NSK0 619 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 PCDHB11Q9Y5F2 797 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 SPO11Q9Y5K1 396 aa19.89■□□□□ 0.77
SMG8-204ENST00000580498 TRBV23OR9-2A0A075B6M9 112 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 C5orf60A6NFR6 353 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 PDZK1P1A8MUH7 402 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 B4GAT1O43505 415 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 PYGMP11217 842 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 CXADRP78310 365 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 P3H1Q32P28 736 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 IYDQ6PHW0 289 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 ADGRG6Q86SQ4 1221 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 UBL7Q96S82 380 aaPredicted RBP19.88■□□□□ 0.77
SMG8-204ENST00000580498 ARFGAP3Q9NP61 516 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 TBC1D29Q9UFV1 150 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 KIF26BQ2KJY2 2108 aa19.88■□□□□ 0.77
SMG8-204ENST00000580498 COL27A1Q8IZC6 1860 aaPredicted RBP19.88■□□□□ 0.77
SMG8-204ENST00000580498 CHD6Q8TD26 2715 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 IGHV1OR21-1A0A087WYE8 117 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 TEX51A0A1B0GUA7 166 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 PPM1DO15297 605 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 FTCDO95954 541 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 VIPP01282 170 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 ZNF7P17097 686 aaPredicted RBP19.87■□□□□ 0.77
SMG8-204ENST00000580498 LPOP22079 712 aaPredicted RBP19.87■□□□□ 0.77
SMG8-204ENST00000580498 IDSP22304 550 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 CD82P27701 267 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 PSMB4P28070 264 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 HALP42357 657 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 CHRNA4P43681 627 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 MAPK10P53779 464 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 EPHA4P54764 986 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 SQSTM1Q13501 440 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 TAF1AQ15573 450 aaPredicted RBP19.87■□□□□ 0.77
SMG8-204ENST00000580498 SLITRK4Q8IW52 837 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 AGBL5Q8NDL9 886 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 ALG3Q92685 438 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 ZNF514Q96K75 400 aaPredicted RBP19.87■□□□□ 0.77
SMG8-204ENST00000580498 ALS2CR12Q96Q35 445 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 B3GNT4Q9C0J1 378 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 IL17CQ9P0M4 197 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 RALYQ9UKM9 306 aaKnown RBP19.87■□□□□ 0.77
SMG8-204ENST00000580498 ZZEF1O43149 2961 aa19.87■□□□□ 0.77
SMG8-204ENST00000580498 AURKAO14965 403 aa19.86■□□□□ 0.77
SMG8-204ENST00000580498 CHUKO15111 745 aa19.86■□□□□ 0.77
SMG8-204ENST00000580498 NVLO15381 856 aaKnown RBP19.86■□□□□ 0.77
SMG8-204ENST00000580498 PSMD3O43242 534 aa19.86■□□□□ 0.77
SMG8-204ENST00000580498 RALBP11234 206 aa19.86■□□□□ 0.77
SMG8-204ENST00000580498 MSH3P20585 1137 aa19.86■□□□□ 0.77
SMG8-204ENST00000580498 CD1CP29017 333 aa19.86■□□□□ 0.77
SMG8-204ENST00000580498 SLC5A2P31639 672 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms