RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 COG1Q8WTW3 980 aa18.44■□□□□ 0.54
PPP4R1-215ENST00000580182 LRRC45Q96CN5 670 aa18.44■□□□□ 0.54
PPP4R1-215ENST00000580182 PBKQ96KB5 322 aa18.44■□□□□ 0.54
PPP4R1-215ENST00000580182 LRIT1Q9P2V4 623 aa18.44■□□□□ 0.54
PPP4R1-215ENST00000580182 SLC23A2Q9UGH3 650 aa18.44■□□□□ 0.54
PPP4R1-215ENST00000580182 FEZ2Q9UHY8 353 aaPredicted RBP18.44■□□□□ 0.54
PPP4R1-215ENST00000580182 ZFC3H1O60293 1989 aaKnown RBP18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 KIF5CO60282 957 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 PRAMEF1O95521 474 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 GLB1P16278 677 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 ACTN2P35609 894 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 SEMA5AQ13591 1074 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 GPRC6AQ5T6X5 926 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 CACTIN-AS1Q8N1I8 211 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 OR6C4Q8NGE1 309 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 ZNF398Q8TD17 642 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 DNAJC1Q96KC8 554 aaKnown RBP18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 AP1M1Q9BXS5 423 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 KLC4Q9NSK0 619 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 PAK5Q9P286 719 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 TBC1D29Q9UFV1 150 aa18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 ZNF106Q9H2Y7 1883 aaKnown RBP18.43■□□□□ 0.54
PPP4R1-215ENST00000580182 A0A1W2PQM1 296 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 CCDC78A2IDD5 438 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 E7EVH7 732 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 NTN3O00634 580 aaPredicted RBP18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 VEGFDO43915 354 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 CSO75390 466 aaKnown RBP18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 SRP72O76094 671 aaKnown RBP18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 SUN1O94901 812 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 RPLP0P05388 317 aaKnown RBP18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 LMAN1P49257 510 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 PEX6Q13608 980 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 ITGA9Q13797 1035 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 SEPT6Q14141 434 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 TTC27Q6P3X3 843 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 GSTA5Q7RTV2 222 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 LRRTM4Q86VH4 590 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 RASGEF1AQ8N9B8 481 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 KDF1Q8NAX2 398 aaPredicted RBP18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 DDHD1Q8NEL9 900 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 NAT14Q8WUY8 206 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 CCDC97Q96F63 343 aaPredicted RBP18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 OSBPL9Q96SU4 736 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 FAM96AQ9H5X1 160 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 ASB8Q9H765 288 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 APPL1Q9UKG1 709 aa18.42■□□□□ 0.54
PPP4R1-215ENST00000580182 ERI2A8K979 691 aaKnown RBP18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 GPR89AB7ZAQ6 455 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 ZNF185O15231 689 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 PPM1DO15297 605 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 NUDT21O43809 227 aaKnown RBP18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 SNX2O60749 519 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 GPR89BP0CG08 455 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 CTSCP53634 463 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 PDE1BQ01064 536 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 CYP4F3Q08477 520 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 TRIP13Q15645 432 aaPredicted RBP18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 ST3GAL2Q16842 350 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 ISXQ2M1V0 245 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 CCDC38Q502W7 563 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 LDLRAP1Q5SW96 308 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 LINC00523Q86TU6 105 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 CCNJLQ8IV13 435 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 DNAAF3Q8N9W5 541 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 ZCCHC14Q8WYQ9 949 aaKnown RBP18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 DEPDC7Q96QD5 511 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 LRRN3Q9H3W5 708 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 PRDM8Q9NQV8 689 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 ATXN7L1Q9ULK2 861 aaPredicted RBP18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 DNAJC16Q9Y2G8 782 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 KNTC1P50748 2209 aa18.41■□□□□ 0.54
PPP4R1-215ENST00000580182 MAP1BP46821 2468 aaKnown RBP18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 FREM2Q5SZK8 3169 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 A6NCN8 305 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 RHPN2P1A8MT19 583 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 TAF4O00268 1085 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 KMOO15229 486 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 B4GAT1O43505 415 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 APRTP07741 180 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 PRSS56P0CW18 603 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 ZNF7P17097 686 aaPredicted RBP18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 CDKN1CP49918 316 aaPredicted RBP18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 PDX1P52945 283 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 OR1D5P58170 312 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 B4GALNT1Q00973 533 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 CDH17Q12864 832 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 NFATC2Q13469 925 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 GTF2H3Q13889 308 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 SPIDRQ14159 915 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 INSCQ1MX18 579 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 PPP1R21Q6ZMI0 780 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 RBM44Q6ZP01 1051 aaKnown RBP18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 SPRED1Q7Z699 444 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 C11orf96Q7Z7L8 435 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 TRAPPC5Q8IUR0 188 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 SLC37A2Q8TED4 501 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 TTC25Q96NG3 672 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 OSGEPL1Q9H4B0 414 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 CCDC86Q9H6F5 360 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms