RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 A0A0U1RQS6 177 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 C1orf232A0A0U1RR37 186 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 DPM1O60762 260 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 CLDN7O95471 211 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 NELFEP18615 380 aaKnown RBP13.16□□□□□ -0.3
COPS3-214ENST00000577246 AMPD1P23109 780 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 PTPN4P29074 926 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 SPINT3P49223 89 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 INSCQ1MX18 579 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 NADK2Q4G0N4 442 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 ANKRD20A8PQ5CZ79 823 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
COPS3-214ENST00000577246 ALG1LQ6GMV1 187 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 TIGD7Q6NT04 549 aaPredicted RBP13.16□□□□□ -0.3
COPS3-214ENST00000577246 POLNQ7Z5Q5 900 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 TRIM11Q96F44 468 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 TDRD1Q9BXT4 1180 aaKnown RBP13.16□□□□□ -0.3
COPS3-214ENST00000577246 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 NUP62CLQ9H1M0 184 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
COPS3-214ENST00000577246 SLAMF7Q9NQ25 335 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
COPS3-214ENST00000577246 EPHA6Q9UF33 1036 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 RARRES3Q9UL19 164 aa13.16□□□□□ -0.3
COPS3-214ENST00000577246 PCYT1BQ9Y5K3 369 aaPredicted RBP13.16□□□□□ -0.3
COPS3-214ENST00000577246 PDZK1P1A8MUH7 402 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 LGALS16A8MUM7 142 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 TMCO5BA8MYB1 307 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
COPS3-214ENST00000577246 LEPRP48357 1165 aaKnown RBP13.15□□□□□ -0.3
COPS3-214ENST00000577246 ZNF165P49910 485 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 ACY1Q03154 408 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 UBXN1Q04323 297 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 TUBB3Q13509 450 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 INPP5JQ15735 1006 aaPredicted RBP13.15□□□□□ -0.3
COPS3-214ENST00000577246 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 TDRD12Q587J7 1177 aaKnown RBP13.15□□□□□ -0.3
COPS3-214ENST00000577246 IRGCQ6NXR0 463 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 KLHL35Q6PF15 583 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 SIDT2Q8NBJ9 832 aaKnown RBP13.15□□□□□ -0.3
COPS3-214ENST00000577246 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 UBXN4Q92575 508 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 HSPH1Q92598 858 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 CXorf40BQ96DE9 158 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 ZSCAN5AQ9BUG6 496 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 RAB33BQ9H082 229 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 ING2Q9H160 280 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 PCDH9Q9HC56 1237 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 TRIM39Q9HCM9 518 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 RAD18Q9NS91 495 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 ETNK2Q9NVF9 386 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 TAS2R14Q9NYV8 317 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 ATXN10Q9UBB4 475 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 CHKBQ9Y259 395 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 SLC30A1Q9Y6M5 507 aa13.15□□□□□ -0.3
COPS3-214ENST00000577246 KMOO15229 486 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 SLC25A14O95258 325 aaPredicted RBP13.14□□□□□ -0.31
COPS3-214ENST00000577246 MYBL1P10243 752 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 ZNF8P17098 575 aaPredicted RBP13.14□□□□□ -0.31
COPS3-214ENST00000577246 VCLP18206 1134 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 ARL4DP49703 201 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 CCL11P51671 97 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 PDPK2PQ6A1A2 396 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 FAM92BQ6ZTR7 304 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 LRRTM4Q86VH4 590 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 RHOT1Q8IXI2 618 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 PRR7Q8TB68 274 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 TEKT4Q8WW24 435 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 RNF31Q96EP0 1072 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 ERGIC2Q96RQ1 377 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 WDR24Q96S15 920 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 TIMM29Q9BSF4 260 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 MLPHQ9BV36 600 aaPredicted RBP13.14□□□□□ -0.31
COPS3-214ENST00000577246 SPATA16Q9BXB7 569 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 ADGRE3Q9BY15 652 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 OR2AG1Q9H205 316 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 IGSF5Q9NSI5 407 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
COPS3-214ENST00000577246 UTP20O75691 2785 aaKnown RBP13.14□□□□□ -0.31
COPS3-214ENST00000577246 SSU72P8A0A1W2PR75 194 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 ARGFXA6NJG6 315 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 TCP11X1B4DZS4 312 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 MATN3O15232 486 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 CPNE3O75131 537 aaKnown RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 GZMAP12544 262 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 ZNF7P17097 686 aaPredicted RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 LPOP22079 712 aaPredicted RBP13.13□□□□□ -0.31
COPS3-214ENST00000577246 IDSP22304 550 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 DCTP40126 519 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 SLC19A1P41440 591 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 HALP42357 657 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 DSC2Q02487 901 aa13.13□□□□□ -0.31
COPS3-214ENST00000577246 KRT81Q14533 505 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms