RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MT-ND3P03897 115 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 SLC2A4P14672 509 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 FOLR1P15328 257 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF30P17039 623 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 TNFRSF8P28908 595 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 PTPN4P29074 926 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 EPHB1P54762 984 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 PPP1CAP62136 330 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 IL10RAQ13651 578 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 KCNAB1Q14722 419 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 KRT31Q15323 416 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 SEPT7Q16181 437 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 RALGPS1Q5JS13 557 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 C1QL3Q5VWW1 255 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 PAPD7Q5XG87 772 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 IRGCQ6NXR0 463 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 CERS6Q6ZMG9 384 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 TICAM1Q8IUC6 712 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 AOPEPQ8N6M6 819 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 RBMXL3Q8N7X1 1067 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 NSMCE1Q8WV22 266 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 THAP4Q8WY91 577 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 PCMTD1Q96MG8 357 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 BRD8Q9H0E9 1235 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 OR2AG1Q9H205 316 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 OSGEPL1Q9H4B0 414 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 FAM83DQ9H4H8 585 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 ZWILCHQ9H900 591 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 RMI1Q9H9A7 625 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 UCK1Q9HA47 277 aa9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 FARSAQ9Y285 508 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 PCDHGA9Q9Y5G4 932 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-220ENST00000576940 IGHV5-51A0A0C4DH38 117 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 A6NL46 340 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF185O15231 689 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 LRCH4O75427 683 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 RNF8O76064 485 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 BRAFP15056 766 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 TCF4P15884 667 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 NELFEP18615 380 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 RPL10P27635 214 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 IL1R2P27930 398 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 SPINT3P49223 89 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 CLCNKAP51800 687 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 CDH6P55285 790 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 RPS15P62841 145 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 DSC2Q02487 901 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 LAMB3Q13751 1172 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 NR6A1Q15406 480 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 SMTNL2Q2TAL5 461 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 PLA2G4EQ3MJ16 856 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 FAM69BQ5VUD6 431 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 PLEKHA7Q6IQ23 1121 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 TMCO3Q6UWJ1 677 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 PRSS42Q7Z5A4 293 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 POLNQ7Z5Q5 900 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 PHYKPLQ8IUZ5 450 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 TRIM48Q8IWZ4 208 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 ATPAF2Q8N5M1 289 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 TEX26Q8N6G2 289 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 FDCSPQ8NFU4 85 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 LRRN4Q8WUT4 740 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 NUDT9Q9BW91 350 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 GPR87Q9BY21 358 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 CARD9Q9H257 536 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 PDE7BQ9NP56 450 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 TRIM10Q9UDY6 481 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 RARRES3Q9UL19 164 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 DNAJC16Q9Y2G8 782 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 ADGRG1Q9Y653 693 aa9.95□□□□□ -0.82
NPLOC4-220ENST00000576940 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF106Q9H2Y7 1883 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 OR52A4PA6NMU1 304 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 PDZK1P1A8MUH7 402 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 H3BRJ5 948 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 CBX6O95503 412 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 IL4RP24394 825 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 PTGIRP43119 386 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 DRG2P55039 364 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 TUBB3Q13509 450 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 GPR18Q14330 331 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 CHRNA6Q15825 494 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 PLEKHN1Q494U1 663 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 TDRD12Q587J7 1177 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 FAM182AQ5T1J6 154 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 FKBP15Q5T1M5 1219 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 HENMT1Q5T8I9 393 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 SLC6A19Q695T7 634 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 TXNRD3NBQ6F5E7 133 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 LCN10Q6JVE6 187 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 CRTC3Q6UUV7 619 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 ADGRG6Q86SQ4 1221 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 SYVN1Q86TM6 617 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 PSTKQ8IV42 348 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 AVL9Q8NBF6 648 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 LPCAT1Q8NF37 534 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 NEK11Q8NG66 645 aa9.94□□□□□ -0.82
NPLOC4-220ENST00000576940 HSPH1Q92598 858 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms