RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MMP12P39900 470 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 NOP2P46087 812 aaKnown RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 HK3P52790 923 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 NDST2P52849 883 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 SRP54P61011 504 aaKnown RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 CCL7P80098 99 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 ELP6Q0PNE2 266 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 RALGDSQ12967 914 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 NFATC4Q14934 902 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 STX1AQ16623 288 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 PPP6R3Q5H9R7 873 aaPredicted RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 KIAA1614Q5VZ46 1190 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 AFMIDQ63HM1 303 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 ERAP2Q6P179 960 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 POMZP3Q6PJE2 187 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 RBM44Q6ZP01 1051 aaKnown RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 CYP4V2Q6ZWL3 525 aaPredicted RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 ZNF571Q7Z3V5 609 aaPredicted RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 ZSCAN30Q86W11 494 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 LSMEM2Q8N112 164 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 SDR16C5Q8N3Y7 309 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 ZNF843Q8N446 348 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 Q8N9G6 341 aaPredicted RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 ANKRD20A12PQ8NF67 263 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 CCL4L1Q8NHW4 92 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 KCNE4Q8WWG9 221 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 OR1E3Q8WZA6 343 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 PDXPQ96GD0 296 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 SLC46A1Q96NT5 459 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 DNAJC7Q99615 494 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 C1QTNF7Q9BXJ2 289 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 CPEB1Q9BZB8 566 aaKnown RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 EDEM3Q9BZQ6 932 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 SEMA4CQ9C0C4 833 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 EPN3Q9H201 632 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 PIF1Q9H611 641 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 SUDS3Q9H7L9 328 aaPredicted RBP6.24□□□□□ -1.41
NUP88-212ENST00000576708 MYO1AQ9UBC5 1043 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 GPR34Q9UPC5 381 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 ATP8A1Q9Y2Q0 1164 aa6.24□□□□□ -1.41
NUP88-212ENST00000576708 KNTC1P50748 2209 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 LRRK1Q38SD2 2015 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 A0A0U1RQS6 177 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 TEX51A0A1B0GUA7 166 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 A0A1W2PQM1 296 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ARHGAP42A6NI28 874 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 PYCARD-AS1I3L0S3 204 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 DDX3XO00571 662 aaKnown RBP eCLIP6.23□□□□□ -1.41
NUP88-212ENST00000576708 NTN3O00634 580 aaPredicted RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 AURKAO14965 403 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 DAPK3O43293 454 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 LRCH4O75427 683 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 PALMO75781 387 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 RECQL5O94762 991 aaPredicted RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 TNFP01375 233 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 FTLP02792 175 aaPredicted RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 RPLP0P05388 317 aaKnown RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 IL1R2P27930 398 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 RBMS1P29558 406 aaKnown RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 TRHRP34981 398 aaPredicted RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 PEX5P50542 639 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 SCNN1BP51168 640 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 SUOXP51687 545 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 AIF1P55008 147 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 TMPRSS3P57727 454 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ERVPABLB-1P60509 514 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 PPP2R2AP63151 447 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 CFHR1Q03591 330 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 SLC10A7Q0GE19 358 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 SRSF6Q13247 344 aaKnown RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 SPIDRQ14159 915 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 LY6DQ14210 128 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ELOCQ15369 112 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 TGIF1Q15583 401 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ASIC2Q16515 512 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ANO6Q4KMQ2 910 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 TAF1BQ53T94 588 aaPredicted RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 CFAP58Q5T655 872 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ERMARDQ5T6L9 678 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 BROXQ5VW32 411 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 DENND2CQ68D51 928 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 PLEKHA7Q6IQ23 1121 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ESRP1Q6NXG1 681 aaKnown RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 LIPIQ6XZB0 460 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 RFX8Q6ZV50 586 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 PGBD5Q8N414 524 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 FSTL5Q8N475 847 aaPredicted RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 PAF1Q8N7H5 531 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ARL10Q8N8L6 244 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 HCAR2Q8TDS4 363 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ECHDC3Q96DC8 303 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 TBATAQ96M53 351 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 WDR92Q96MX6 357 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ZNF641Q96N77 438 aaPredicted RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 SMIM14Q96QK8 99 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 G6PC3Q9BUM1 346 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 CINPQ9BW66 212 aaPredicted RBP6.23□□□□□ -1.41
NUP88-212ENST00000576708 TMEM168Q9H0V1 697 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 HAUS4Q9H6D7 363 aa6.23□□□□□ -1.41
NUP88-212ENST00000576708 ATP13A3Q9H7F0 1226 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms