RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CCNG2Q16589 344 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 PLA2G4EQ3MJ16 856 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 C14orf28Q4W4Y0 310 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 DENND5AQ6IQ26 1287 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 CRTC3Q6UUV7 619 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 KLHDC8BQ8IXV7 354 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 SPATA4Q8NEY3 305 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 OR4K2Q8NGD2 314 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 RMI1Q9H9A7 625 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 RABGEF1Q9UJ41 708 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 KCNK6Q9Y257 313 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 MYLKQ15746 1914 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 E7EVH7 732 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 PSMD3O43242 534 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 GRID2O43424 1007 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 NUAK1O60285 661 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A9O60656 530 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 PPFIA2O75334 1257 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 PRAMEF1O95521 474 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 TPH1P17752 444 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A6P19224 532 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A1P22309 533 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A4P22310 534 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A3P35503 534 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A5P35504 534 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 TUBB4BP68371 445 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 TMPRSS15P98073 1019 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 C2orf54Q08AI8 447 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 BIRC2Q13490 618 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 LRP8Q14114 963 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 SEPT6Q14141 434 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 HLTFQ14527 1009 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPAIN-216ENST00000575599 KHDC1Q4VXA5 237 aaKnown RBP13.1□□□□□ -0.31
RPAIN-216ENST00000575599 OGFOD3Q6PK18 319 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 GSTA5Q7RTV2 222 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 ADGRG6Q86SQ4 1221 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 Q8N9G6 341 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-216ENST00000575599 GLIS1Q8NBF1 620 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 BRSK1Q8TDC3 778 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 PATE1Q8WXA2 126 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 MAGOHBQ96A72 148 aaKnown RBP13.1□□□□□ -0.31
RPAIN-216ENST00000575599 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 VPS35Q96QK1 796 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A7Q9HAW7 530 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A10Q9HAW8 530 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 UGT1A8Q9HAW9 530 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 ETNK1Q9HBU6 452 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 ARNT2Q9HBZ2 717 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 FEZ2Q9UHY8 353 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-216ENST00000575599 FKBPLQ9UIM3 349 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 TMPRSS11EQ9UL52 423 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 RNF215Q9Y6U7 377 aa13.1□□□□□ -0.31
RPAIN-216ENST00000575599 ZNF106Q9H2Y7 1883 aaKnown RBP13.1□□□□□ -0.31
RPAIN-216ENST00000575599 RP1P56715 2156 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 WDFY3Q8IZQ1 3526 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ARHGEF17Q96PE2 2063 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 CCL22O00626 93 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 GAPDHSO14556 408 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 PHF2O75151 1096 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 CDK14O94921 469 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ECEL1O95672 775 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 RPLP0P05388 317 aaKnown RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 PROS1P07225 676 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 GLB1P16278 677 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 FDFT1P37268 417 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 KCNJ1P48048 391 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ZNF140P52738 457 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 PDE1BQ01064 536 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 MSLNQ13421 630 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 PEX6Q13608 980 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ITGA9Q13797 1035 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 GTF2H3Q13889 308 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 SPIDRQ14159 915 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 POU6F1Q14863 301 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ST3GAL2Q16842 350 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 KCTD19Q17RG1 926 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 INSCQ1MX18 579 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 CERCAMQ5T4B2 595 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 CDCP2Q5VXM1 449 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 DRICH1Q6PGQ1 229 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 PPP1R21Q6ZMI0 780 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ZNF572Q7Z3I7 529 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 DCBLD1Q8N8Z6 715 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 OR6C4Q8NGE1 309 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 OR52K1Q8NGK4 314 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 OR13C4Q8NGS5 318 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ZCCHC14Q8WYQ9 949 aaKnown RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 DEPDC7Q96QD5 511 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 OSGEPL1Q9H4B0 414 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 PAK5Q9P286 719 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 LRIT1Q9P2V4 623 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 PCDHB1Q9Y5F3 818 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ASXL3Q9C0F0 2248 aa13.09□□□□□ -0.31
RPAIN-216ENST00000575599 ZFC3H1O60293 1989 aaKnown RBP13.09□□□□□ -0.31
RPAIN-216ENST00000575599 TRBV23OR9-2A0A075B6M9 112 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms