RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MIPP30301 263 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 CAPZBP47756 277 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 ARL4DP49703 201 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 UBE2HP62256 183 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 OGDHQ02218 1023 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 ACY1Q03154 408 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 ITKQ08881 620 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 NADK2Q4G0N4 442 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 BOLA3Q53S33 107 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 ANKRD20A8PQ5CZ79 823 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 ZNF787Q6DD87 383 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 JMJD6Q6NYC1 403 aaPredicted RBP8.87□□□□□ -0.99
SMG6-218ENST00000575454 KLHL35Q6PF15 583 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 RFLNAQ6ZTI6 216 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 RHOT1Q8IXI2 618 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 TEX26Q8N6G2 289 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 NEK11Q8NG66 645 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 UBXN4Q92575 508 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 PNPLA2Q96AD5 504 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 MOCOSQ96EN8 888 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 PCMTD1Q96MG8 357 aaPredicted RBP8.87□□□□□ -0.99
SMG6-218ENST00000575454 LYSMD1Q96S90 227 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 TRIM55Q9BYV6 548 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 RAB33BQ9H082 229 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 SAMSN1Q9NSI8 373 aaKnown RBP8.87□□□□□ -0.99
SMG6-218ENST00000575454 KLC4Q9NSK0 619 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 TAB2Q9NYJ8 693 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 PKD2L2Q9NZM6 624 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 OGFRQ9NZT2 677 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 TMEM63CQ9P1W3 806 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 MAP10Q9P2G4 905 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 AMACRQ9UHK6 382 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 CNOT6Q9ULM6 557 aaKnown RBP8.87□□□□□ -0.99
SMG6-218ENST00000575454 FARSAQ9Y285 508 aaKnown RBP8.87□□□□□ -0.99
SMG6-218ENST00000575454 TMEM191CA6NGB0 347 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 ARGFXA6NJG6 315 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 PDZK1P1A8MUH7 402 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 PDHA1P08559 390 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 RNF224P0DH78 156 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 FERP16591 822 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 VCLP18206 1134 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 TNFRSF8P28908 595 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 PCK1P35558 622 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 SPINT3P49223 89 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 KLK7P49862 253 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 RIPPLY3P57055 190 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 MAXP61244 160 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 TUBB3Q13509 450 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 PTPRRQ15256 657 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 DPYSL2Q16555 572 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 HENMT1Q5T8I9 393 aaKnown RBP8.86□□□□□ -0.99
SMG6-218ENST00000575454 AGAP9Q5VTM2 703 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 PLEKHA7Q6IQ23 1121 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 WASH2PQ6VEQ5 465 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 KMT5CQ86Y97 462 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 TP53INP2Q8IXH6 220 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 SIDT2Q8NBJ9 832 aaKnown RBP8.86□□□□□ -0.99
SMG6-218ENST00000575454 TTC13Q8NBP0 860 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 ANKRD20A12PQ8NF67 263 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 OR8K5Q8NH50 307 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 SLC41A2Q96JW4 573 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 C5orf34Q96MH7 638 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 PHF12Q96QT6 1004 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 OSGEPL1Q9H4B0 414 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 TRIM39Q9HCM9 518 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 SLC40A1Q9NP59 571 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 NT5MQ9NPB1 228 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 WASH6PQ9NQA3 447 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 RAD18Q9NS91 495 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 SEMA5BQ9P283 1151 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 SLC5A6Q9Y289 635 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 PCYT1BQ9Y5K3 369 aaPredicted RBP8.86□□□□□ -0.99
SMG6-218ENST00000575454 SLC30A1Q9Y6M5 507 aa8.86□□□□□ -0.99
SMG6-218ENST00000575454 SDK2Q58EX2 2172 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 C1orf232A0A0U1RR37 186 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 EPHB6O15197 1021 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 KMOO15229 486 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 KIF1CO43896 1103 aaKnown RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 VEGFDO43915 354 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 KLHL41O60662 606 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 KCNJ13O60928 360 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 CPNE3O75131 537 aaKnown RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 CEACAM4O75871 244 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 SLC25A14O95258 325 aaPredicted RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 CLDN7O95471 211 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 CLDN1O95832 211 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 LDLRP01130 860 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 KLK3P07288 261 aaPredicted RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 ZNF8P17098 575 aaPredicted RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 IDSP22304 550 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 SLC19A1P41440 591 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 RRADP55042 308 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 GSDMDP57764 484 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 MRPL49Q13405 166 aaKnown RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 ELOAQ14241 798 aaKnown RBP8.85□□□□□ -0.99
SMG6-218ENST00000575454 KRT31Q15323 416 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 INSCQ1MX18 579 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 DPCR1Q3MIW9 517 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 ZRANB3Q5FWF4 1079 aa8.85□□□□□ -0.99
SMG6-218ENST00000575454 ZNF569Q5MCW4 686 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms