RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ANKRD36A6QL64 1941 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 H0Y858 1186 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 FGF1P05230 155 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 HLA-DPA1P20036 260 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 HMOX2P30519 316 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 TTKP33981 857 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 POLR2JP52435 117 aaKnown RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 OR4D2P58180 307 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 IL10RBQ08334 325 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 TYSND1Q2T9J0 566 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 GDF6Q6KF10 455 aaPredicted RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 TBC1D15Q8TC07 691 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 FUBP1Q96AE4 644 aaKnown RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 ESAMQ96AP7 390 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 PPP1R14BQ96C90 147 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 CDKN2AIPNLQ96HQ2 116 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 SUSD3Q96L08 255 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 PARK7Q99497 189 aaKnown RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 BRINP2Q9C0B6 783 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 POLR1EQ9GZS1 481 aaKnown RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 PAIP1Q9H074 479 aaKnown RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 TLR9Q9NR96 1032 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 CPA4Q9UI42 421 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 LEF1Q9UJU2 399 aaPredicted RBP18.92■□□□□ 0.62
SCARF1-206ENST00000573852 TRPM7Q96QT4 1865 aa18.92■□□□□ 0.62
SCARF1-206ENST00000573852 RAMP2O60895 175 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 PBX3P40426 434 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 SERINC3Q13530 473 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 XKR5Q6UX68 686 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 PEX13Q92968 403 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 RNF145Q96MT1 663 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 SYTL2Q9HCH5 934 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 PKD2L2Q9NZM6 624 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 IFT80Q9P2H3 777 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-206ENST00000573852 SCML2Q9UQR0 700 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 LCHNA4D1U4 455 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 NPEPPSL1A6NEC2 478 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 B4GAT1O43505 415 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 CD52P31358 61 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 MRPL19P49406 292 aaKnown RBP18.91■□□□□ 0.62
SCARF1-206ENST00000573852 GRIK2Q13002 908 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 TUSC3Q13454 348 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 RALGPS2Q86X27 583 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-206ENST00000573852 TANKQ92844 425 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 MYEOVQ96EZ4 313 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 GMIPQ9P107 970 aa18.91■□□□□ 0.62
SCARF1-206ENST00000573852 KANSL1LA0AUZ9 987 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 SNX2O60749 519 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 HLCSP50747 726 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 YWHAHQ04917 246 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-206ENST00000573852 ZIK1Q3SY52 487 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-206ENST00000573852 AASDHQ4L235 1098 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-206ENST00000573852 OTUD3Q5T2D3 398 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-206ENST00000573852 CCNYL2Q5T2Q4 361 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 SLC2A7Q6PXP3 512 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 GIPC3Q8TF64 312 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 GPR21Q99679 349 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 NTN4Q9HB63 628 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 TAS2R13Q9NYV9 303 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 PCTPQ9UKL6 214 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 PADI3Q9ULW8 664 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 TRIM64BA6NI03 449 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 ESRRBO95718 433 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 HMBSP08397 361 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 ELK4P28324 431 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 HTR1EP28566 365 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 EMX2Q04743 252 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 RAD51Q06609 339 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 TMEM214Q6NUQ4 689 aaKnown RBP18.9■□□□□ 0.62
SCARF1-206ENST00000573852 MIB1Q86YT6 1006 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 DCBLD1Q8N8Z6 715 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 BPIFB1Q8TDL5 484 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 MUS81Q96NY9 551 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 HGH1Q9BTY7 390 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 TBCCD1Q9NVR7 557 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 ASB1Q9Y576 335 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 ACTL7AQ9Y615 435 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 GBF1Q92538 1859 aa18.9■□□□□ 0.62
SCARF1-206ENST00000573852 TYW5A2RUC4 315 aaKnown RBP18.89■□□□□ 0.62
SCARF1-206ENST00000573852 ZSCAN9O15535 394 aaPredicted RBP18.89■□□□□ 0.62
SCARF1-206ENST00000573852 ZNF623O75123 536 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 UROSP10746 265 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 MATN1P21941 496 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 GRK4P32298 578 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 MAPK10P53779 464 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 ILF2Q12905 390 aaKnown RBP18.89■□□□□ 0.62
SCARF1-206ENST00000573852 BNIP3Q12983 259 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 RBBP7Q16576 425 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 FAM117BQ6P1L5 589 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 RIMKLAQ8IXN7 391 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 PROKR1Q8TCW9 393 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 GPR152Q8TDT2 470 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 OSCP1Q8WVF1 389 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 ISG20Q96AZ6 181 aaKnown RBP18.89■□□□□ 0.62
SCARF1-206ENST00000573852 NUSAP1Q9BXS6 441 aaKnown RBP18.89■□□□□ 0.62
SCARF1-206ENST00000573852 PCDHGA11Q9Y5H2 935 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 SPO11Q9Y5K1 396 aa18.89■□□□□ 0.62
SCARF1-206ENST00000573852 BTN3A1O00481 513 aa18.89■□□□□ 0.61
SCARF1-206ENST00000573852 GPR182O15218 404 aa18.89■□□□□ 0.61
SCARF1-206ENST00000573852 INHBBP09529 407 aa18.89■□□□□ 0.61
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