RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 UBE2IP63279 158 aaKnown RBP17.1■□□□□ 0.33
SMG6-212ENST00000573153 OTUD4Q01804 1114 aaKnown RBP17.1■□□□□ 0.33
SMG6-212ENST00000573153 SRSF6Q13247 344 aaKnown RBP17.1■□□□□ 0.33
SMG6-212ENST00000573153 MPP3Q13368 585 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 OLIG2Q13516 323 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 SLC1A5Q15758 541 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 AMZ1Q400G9 498 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 ATP13A5Q4VNC0 1218 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 CCDC70Q6NSX1 233 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 IYDQ6PHW0 289 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 FOXR1Q6PIV2 292 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 XKR5Q6UX68 686 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 USP53Q70EK8 1073 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 CHST15Q7LFX5 561 aaPredicted RBP17.1■□□□□ 0.33
SMG6-212ENST00000573153 PID1Q7Z2X4 250 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 RNF10Q8N5U6 811 aaKnown RBP17.1■□□□□ 0.33
SMG6-212ENST00000573153 PLEKHG4BQ96PX9 1271 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 VPS35Q96QK1 796 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 SPATA16Q9BXB7 569 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 GBA3Q9H227 469 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 TRIM39Q9HCM9 518 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 IL26Q9NPH9 171 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 ZNHIT2Q9UHR6 403 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 AMFRQ9UKV5 643 aa17.1■□□□□ 0.33
SMG6-212ENST00000573153 TRBV23OR9-2A0A075B6M9 112 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 RHPN2P1A8MT19 583 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 GPR89AB7ZAQ6 455 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 NVLO15381 856 aaKnown RBP17.09■□□□□ 0.33
SMG6-212ENST00000573153 DDX3YO15523 660 aaKnown RBP17.09■□□□□ 0.33
SMG6-212ENST00000573153 KLK10O43240 276 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 GRID2O43424 1007 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 TJP3O95049 919 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 GPR89BP0CG08 455 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 CCL4P13236 92 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 BRAFP15056 766 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 HLA-DPA1P20036 260 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 ALDH4A1P30038 563 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 LIMK2P53671 638 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 GSDMDP57764 484 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 TGIF1Q15583 401 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 MAP9Q49MG5 647 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 PEX26Q7Z412 305 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 DTX1Q86Y01 620 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 CDKL3Q8IVW4 592 aaPredicted RBP17.09■□□□□ 0.33
SMG6-212ENST00000573153 SPC24Q8NBT2 197 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 RCBTB1Q8NDN9 531 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 CCDC74BQ96LY2 380 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 FAM118BQ9BPY3 351 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 FERMT1Q9BQL6 677 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 DESI2Q9BSY9 194 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 GPR63Q9BZJ6 419 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 OR2AG1Q9H205 316 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 BPIFA1Q9NP55 256 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 SARS2Q9NP81 518 aaKnown RBP17.09■□□□□ 0.33
SMG6-212ENST00000573153 HACD3Q9P035 362 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 PISDQ9UG56 409 aa17.09■□□□□ 0.33
SMG6-212ENST00000573153 PRAMEF33A0A0G2JMD5 474 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 GOLGA6L6A8MZA4 724 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 H7C0C1 242 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 ATXN7O15265 892 aaPredicted RBP17.08■□□□□ 0.32
SMG6-212ENST00000573153 PRAMEF10O60809 474 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 F3P13726 295 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 ATP5OP48047 213 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 CXADRP78310 365 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 KLF1Q13351 362 aaPredicted RBP17.08■□□□□ 0.32
SMG6-212ENST00000573153 PTPRCAPQ14761 206 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 ITPRIPL1Q6GPH6 555 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 MICALCLQ6ZW33 695 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 GPR155Q7Z3F1 870 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 PIM3Q86V86 326 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 UBL4BQ8N7F7 174 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 BMPERQ8N8U9 685 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 OR4D9Q8NGE8 314 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 TTC9Q92623 222 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 TMEM159Q96B96 161 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 HES6Q96HZ4 224 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 UBL7Q96S82 380 aaPredicted RBP17.08■□□□□ 0.32
SMG6-212ENST00000573153 STRADBQ9C0K7 418 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 PRDM8Q9NQV8 689 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 OGFRQ9NZT2 677 aa17.08■□□□□ 0.32
SMG6-212ENST00000573153 ATRXP46100 2492 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 SDK2Q58EX2 2172 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 MACROD2A1Z1Q3 448 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 K7ENP7 123 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 AGRPO00253 132 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 KALRNO60229 2985 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 ANXA9O76027 345 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 SLC25A14O95258 325 aaPredicted RBP17.07■□□□□ 0.32
SMG6-212ENST00000573153 AGTP01019 485 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 RBP3P10745 1247 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 FGF3P11487 239 aaPredicted RBP17.07■□□□□ 0.32
SMG6-212ENST00000573153 EIF3EP60228 445 aaKnown RBP17.07■□□□□ 0.32
SMG6-212ENST00000573153 ZDHHC20Q5W0Z9 365 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 DENND5AQ6IQ26 1287 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 INO80CQ6PI98 192 aaPredicted RBP17.07■□□□□ 0.32
SMG6-212ENST00000573153 CRTC3Q6UUV7 619 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 RANBP10Q6VN20 620 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 PHYKPLQ8IUZ5 450 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms