RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TOX3O15405 576 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-206ENST00000572083 VIPP01282 170 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 ZNF8P17098 575 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-206ENST00000572083 XRCC1P18887 633 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-206ENST00000572083 CAPZBP47756 277 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 SPINT3P49223 89 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 PRR30Q53SZ7 412 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-206ENST00000572083 CACHD1Q5VU97 1274 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 PPP1R2P3Q6NXS1 205 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 CRTC3Q6UUV7 619 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 FAM92BQ6ZTR7 304 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 IRF2BP2Q7Z5L9 587 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 PPP1R3BQ86XI6 285 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 ZNF653Q96CK0 615 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 BRD8Q9H0E9 1235 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 OR2AG1Q9H205 316 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 ZNF624Q9P2J8 865 aaPredicted RBP19.56■□□□□ 0.72
CCDC40-206ENST00000572083 MAP4K5Q9Y4K4 846 aa19.56■□□□□ 0.72
CCDC40-206ENST00000572083 TEP1Q99973 2627 aaKnown RBP19.56■□□□□ 0.72
CCDC40-206ENST00000572083 SORBS2O94875 1100 aaKnown RBP19.55■□□□□ 0.72
CCDC40-206ENST00000572083 PRLP01236 227 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 CCDC172P0C7W6 258 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 COL8A1P27658 744 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 PCK1P35558 622 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 SLC19A1P41440 591 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 INSCQ1MX18 579 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.55■□□□□ 0.72
CCDC40-206ENST00000572083 TDRD12Q587J7 1177 aaKnown RBP19.55■□□□□ 0.72
CCDC40-206ENST00000572083 TXNRD3NBQ6F5E7 133 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 PRSS42Q7Z5A4 293 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 AOPEPQ8N6M6 819 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 ERGIC2Q96RQ1 377 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 SLC25A23Q9BV35 468 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 FAM83DQ9H4H8 585 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 AKIRIN1Q9H9L7 192 aaPredicted RBP19.55■□□□□ 0.72
CCDC40-206ENST00000572083 CASS4Q9NQ75 786 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 CUEDC1Q9NWM3 386 aaPredicted RBP19.55■□□□□ 0.72
CCDC40-206ENST00000572083 PKD2L2Q9NZM6 624 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 MYO1AQ9UBC5 1043 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 SLC23A2Q9UGH3 650 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 DNAJC16Q9Y2G8 782 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 ADGRG1Q9Y653 693 aa19.55■□□□□ 0.72
CCDC40-206ENST00000572083 PDZK1P1A8MUH7 402 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 C21orf140B9A014 251 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 MFSD11O43934 449 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 MTA2O94776 668 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 RECKO95980 971 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 MT-ND3P03897 115 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 RARAP10276 462 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 CLCNKAP51800 687 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 MRPL49Q13405 166 aaKnown RBP19.54■□□□□ 0.72
CCDC40-206ENST00000572083 ALG1LQ6GMV1 187 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 IRGCQ6NXR0 463 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 FAM199XQ6PEV8 388 aaPredicted RBP19.54■□□□□ 0.72
CCDC40-206ENST00000572083 RAVER1Q8IY67 606 aaKnown RBP19.54■□□□□ 0.72
CCDC40-206ENST00000572083 LYSMD1Q96S90 227 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 PCDH9Q9HC56 1237 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 PCDH18Q9HCL0 1135 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 DTLQ9NZJ0 730 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 LUZP4Q9P127 313 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 LIMA1Q9UHB6 759 aaKnown RBP19.54■□□□□ 0.72
CCDC40-206ENST00000572083 SCINQ9Y6U3 715 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 ESPL1Q14674 2120 aa19.54■□□□□ 0.72
CCDC40-206ENST00000572083 ARGFXA6NJG6 315 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 FTLP02792 175 aaPredicted RBP19.53■□□□□ 0.72
CCDC40-206ENST00000572083 CCL11P51671 97 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 PPP1CAP62136 330 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 TUBB3Q13509 450 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 IL10RAQ13651 578 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 KCNAB1Q14722 419 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 UGT8Q16880 541 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 EIF2S3LQ2VIR3 472 aaKnown RBP19.53■□□□□ 0.72
CCDC40-206ENST00000572083 BOLA3Q53S33 107 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 ANKRD20A8PQ5CZ79 823 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 ZNF569Q5MCW4 686 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 PWWP2BQ6NUJ5 590 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 ANKRD20A12PQ8NF67 263 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 KLHL6Q8WZ60 621 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 CACNA1DQ01668 2161 aa19.53■□□□□ 0.72
CCDC40-206ENST00000572083 OR52A4PA6NMU1 304 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 NELFEP18615 380 aaKnown RBP19.52■□□□□ 0.72
CCDC40-206ENST00000572083 CA4P22748 312 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 RPL10P27635 214 aaKnown RBP19.52■□□□□ 0.72
CCDC40-206ENST00000572083 ZNF165P49910 485 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 NIPAL4Q0D2K0 466 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 MMRN1Q13201 1228 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 GPR18Q14330 331 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 ALS2CLQ60I27 953 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 ARRDC2Q8TBH0 407 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 CCHCR1Q8TD31 782 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 LRRN4Q8WUT4 740 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 ZDHHC12Q96GR4 267 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 SPATA16Q9BXB7 569 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 PDE7BQ9NP56 450 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 ACSS2Q9NR19 701 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 RBM22Q9NW64 420 aaKnown RBP eCLIP19.52■□□□□ 0.72
CCDC40-206ENST00000572083 MAP10Q9P2G4 905 aa19.52■□□□□ 0.72
CCDC40-206ENST00000572083 PCDHGA9Q9Y5G4 932 aaKnown RBP19.52■□□□□ 0.72
CCDC40-206ENST00000572083 TCP11X1B4DZS4 312 aa19.51■□□□□ 0.71
CCDC40-206ENST00000572083 SLC25A14O95258 325 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms