RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 KRCC1Q9NPI7 259 aaPredicted RBP3.01□□□□□ -1.93
RPA1-204ENST00000571725 GPR108Q9NPR9 543 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 POT1Q9NUX5 634 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 ARHGEF38Q9NXL2 777 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 TAB2Q9NYJ8 693 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 SEC63Q9UGP8 760 aaKnown RBP3.01□□□□□ -1.93
RPA1-204ENST00000571725 FBXW11Q9UKB1 542 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 TTC7AQ9ULT0 858 aaPredicted RBP3.01□□□□□ -1.93
RPA1-204ENST00000571725 NENFQ9UMX5 172 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 CMAHPQ9Y471 501 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 NFE2L3Q9Y4A8 694 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 RGPD3A6NKT7 1758 aaPredicted RBP3.01□□□□□ -1.93
RPA1-204ENST00000571725 RGPD4Q7Z3J3 1758 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 DOT1LQ8TEK3 1739 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 NHSQ6T4R5 1651 aa3.01□□□□□ -1.93
RPA1-204ENST00000571725 SCN11AQ9UI33 1791 aa3□□□□□ -1.93
RPA1-204ENST00000571725 MAPK8IP3Q9UPT6 1336 aa3□□□□□ -1.93
RPA1-204ENST00000571725 TNS1Q9HBL0 1735 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 TOGARAM1Q9Y4F4 1720 aa3□□□□□ -1.93
RPA1-204ENST00000571725 A0A1W2PQF6 199 aa3□□□□□ -1.93
RPA1-204ENST00000571725 KANSL1LA0AUZ9 987 aa3□□□□□ -1.93
RPA1-204ENST00000571725 GLOD5A6NK44 160 aa3□□□□□ -1.93
RPA1-204ENST00000571725 ITM2AO43736 263 aa3□□□□□ -1.93
RPA1-204ENST00000571725 RGS11O94810 467 aa3□□□□□ -1.93
RPA1-204ENST00000571725 OR2C1O95371 312 aa3□□□□□ -1.93
RPA1-204ENST00000571725 CLDN7O95471 211 aa3□□□□□ -1.93
RPA1-204ENST00000571725 APOA4P06727 396 aa3□□□□□ -1.93
RPA1-204ENST00000571725 TPOP07202 933 aa3□□□□□ -1.93
RPA1-204ENST00000571725 CELA2AP08217 269 aa3□□□□□ -1.93
RPA1-204ENST00000571725 HMOX1P09601 288 aa3□□□□□ -1.93
RPA1-204ENST00000571725 CHRNB1P11230 501 aa3□□□□□ -1.93
RPA1-204ENST00000571725 GJA1P17302 382 aa3□□□□□ -1.93
RPA1-204ENST00000571725 UBA1P22314 1058 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 RRM1P23921 792 aa3□□□□□ -1.93
RPA1-204ENST00000571725 ACSL1P33121 698 aa3□□□□□ -1.93
RPA1-204ENST00000571725 SHMT1P34896 483 aa3□□□□□ -1.93
RPA1-204ENST00000571725 GARSP41250 739 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 LIG4P49917 911 aa3□□□□□ -1.93
RPA1-204ENST00000571725 METAP2P50579 478 aaKnown RBP eCLIP3□□□□□ -1.93
RPA1-204ENST00000571725 TAS2R40P59535 323 aa3□□□□□ -1.93
RPA1-204ENST00000571725 ADORA2A-AS1P86434 159 aa3□□□□□ -1.93
RPA1-204ENST00000571725 CEBPZQ03701 1054 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 SRSF1Q07955 248 aaKnown RBP eCLIP3□□□□□ -1.93
RPA1-204ENST00000571725 GRIK2Q13002 908 aa3□□□□□ -1.93
RPA1-204ENST00000571725 GRIK3Q13003 919 aa3□□□□□ -1.93
RPA1-204ENST00000571725 PKP1Q13835 747 aa3□□□□□ -1.93
RPA1-204ENST00000571725 KCNC3Q14003 757 aa3□□□□□ -1.93
RPA1-204ENST00000571725 GPR18Q14330 331 aa3□□□□□ -1.93
RPA1-204ENST00000571725 BECN1Q14457 450 aa3□□□□□ -1.93
RPA1-204ENST00000571725 PTGR1Q14914 329 aa3□□□□□ -1.93
RPA1-204ENST00000571725 ALG11Q2TAA5 492 aa3□□□□□ -1.93
RPA1-204ENST00000571725 PPP6R3Q5H9R7 873 aaPredicted RBP3□□□□□ -1.93
RPA1-204ENST00000571725 MTX3Q5HYI7 312 aa3□□□□□ -1.93
RPA1-204ENST00000571725 CXorf66Q5JRM2 361 aaPredicted RBP3□□□□□ -1.93
RPA1-204ENST00000571725 DNTTIP2Q5QJE6 756 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 DCAF12L2Q5VW00 463 aa3□□□□□ -1.93
RPA1-204ENST00000571725 SHC4Q6S5L8 630 aa3□□□□□ -1.93
RPA1-204ENST00000571725 ZNF517Q6ZMY9 492 aaPredicted RBP3□□□□□ -1.93
RPA1-204ENST00000571725 SEPT14Q6ZU15 432 aa3□□□□□ -1.93
RPA1-204ENST00000571725 PIM3Q86V86 326 aa3□□□□□ -1.93
RPA1-204ENST00000571725 DSELQ8IZU8 1212 aa3□□□□□ -1.93
RPA1-204ENST00000571725 MMP21Q8N119 569 aa3□□□□□ -1.93
RPA1-204ENST00000571725 TMEM199Q8N511 208 aa3□□□□□ -1.93
RPA1-204ENST00000571725 NANOGP1Q8N7R0 232 aa3□□□□□ -1.93
RPA1-204ENST00000571725 SMRP1Q8NCR6 262 aa3□□□□□ -1.93
RPA1-204ENST00000571725 GSDMBQ8TAX9 411 aa3□□□□□ -1.93
RPA1-204ENST00000571725 MAGEC3Q8TD91 643 aa3□□□□□ -1.93
RPA1-204ENST00000571725 DNAAF4Q8WXU2 420 aa3□□□□□ -1.93
RPA1-204ENST00000571725 ZKSCAN4Q969J2 545 aaPredicted RBP3□□□□□ -1.93
RPA1-204ENST00000571725 COQ8BQ96D53 544 aa3□□□□□ -1.93
RPA1-204ENST00000571725 SPATA17Q96L03 361 aa3□□□□□ -1.93
RPA1-204ENST00000571725 OR2A14Q96R47 310 aa3□□□□□ -1.93
RPA1-204ENST00000571725 WACQ9BTA9 647 aa3□□□□□ -1.93
RPA1-204ENST00000571725 NPFFR1Q9GZQ6 430 aa3□□□□□ -1.93
RPA1-204ENST00000571725 ISCUQ9H1K1 167 aa3□□□□□ -1.93
RPA1-204ENST00000571725 HRH4Q9H3N8 390 aa3□□□□□ -1.93
RPA1-204ENST00000571725 NDST4Q9H3R1 872 aa3□□□□□ -1.93
RPA1-204ENST00000571725 PLK3Q9H4B4 646 aa3□□□□□ -1.93
RPA1-204ENST00000571725 SLC28A3Q9HAS3 691 aa3□□□□□ -1.93
RPA1-204ENST00000571725 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3□□□□□ -1.93
RPA1-204ENST00000571725 TMEM51Q9NW97 253 aa3□□□□□ -1.93
RPA1-204ENST00000571725 HIF1ANQ9NWT6 349 aa3□□□□□ -1.93
RPA1-204ENST00000571725 TRNAU1APQ9NX07 287 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 CISD1Q9NZ45 108 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 FBXL17Q9UF56 701 aa3□□□□□ -1.93
RPA1-204ENST00000571725 CNOT8Q9UFF9 292 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 ZNF112Q9UJU3 913 aa3□□□□□ -1.93
RPA1-204ENST00000571725 RCOR1Q9UKL0 485 aa3□□□□□ -1.93
RPA1-204ENST00000571725 PCDHA12Q9UN75 941 aa3□□□□□ -1.93
RPA1-204ENST00000571725 COG5Q9UP83 839 aa3□□□□□ -1.93
RPA1-204ENST00000571725 R3HDM2Q9Y2K5 976 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 ZSCAN21Q9Y5A6 473 aaPredicted RBP3□□□□□ -1.93
RPA1-204ENST00000571725 MRC1P22897 1456 aa3□□□□□ -1.93
RPA1-204ENST00000571725 VIRMAQ69YN4 1812 aaKnown RBP3□□□□□ -1.93
RPA1-204ENST00000571725 MAP3K5Q99683 1374 aa3□□□□□ -1.93
RPA1-204ENST00000571725 DLG5Q8TDM6 1919 aa2.99□□□□□ -1.93
RPA1-204ENST00000571725 ZNF804BA4D1E1 1349 aa2.99□□□□□ -1.93
RPA1-204ENST00000571725 ATXN2Q99700 1313 aaKnown RBP2.99□□□□□ -1.93
RPA1-204ENST00000571725 FNDC1Q4ZHG4 1894 aaPredicted RBP2.99□□□□□ -1.93
RPA1-204ENST00000571725 BTAF1O14981 1849 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms