RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 ERICH4A6NGS2 130 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 CCDC69A6NI79 296 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 MS4A18H0YCH9 400 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 VWA5AO00534 786 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 DNPH1O43598 174 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 CCNT1O60563 726 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 PRSS2P07478 247 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 ITGA2BP08514 1039 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 HSPD1P10809 573 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 ATP1A3P13637 1013 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 PKMP14618 531 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 CHRNB2P17787 502 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 CNTFP26441 200 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 TNFRSF8P28908 595 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 MAPK4P31152 587 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 CD86P42081 329 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 MSH2P43246 934 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 CYP2J2P51589 502 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 LIMK1P53667 647 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 RCAN1P53805 252 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 HMGCS2P54868 508 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 ARF3P61204 181 aaPredicted RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 VAMP2P63027 116 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 ARF1P84077 181 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 AKAP17AQ02040 695 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 CRYZQ08257 329 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 TRAF1Q13077 416 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 TRPC3Q13507 836 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 PTK2BQ14289 1009 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 POSTNQ15063 836 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 SHBQ15464 509 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 IMMTQ16891 758 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 ZACNQ401N2 412 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 KRTCAP3Q53RY4 240 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 ARL13AQ5H913 290 aaPredicted RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 DCAF12L2Q5VW00 463 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 GPR139Q6DWJ6 353 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 GALNT17Q6IS24 598 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 IRGCQ6NXR0 463 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 NFRKBQ6P4R8 1299 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 C11orf88Q6PI97 169 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 TRILQ7L0X0 811 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 SLC9B2Q86UD5 537 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 GPSM1Q86YR5 675 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 FAM217AQ8IXS0 508 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 ANKRD52Q8NB46 1076 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 GPRC5AQ8NFJ5 357 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 SLC2A12Q8TD20 617 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 BRSK1Q8TDC3 778 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 CHURC1Q8WUH1 139 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 NUDCD2Q8WVJ2 157 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 CPT1BQ92523 772 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 ESR2Q92731 530 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 RILPL2Q969X0 211 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 EID2BQ96D98 161 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 URB1-AS1Q96HZ7 61 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 CCDC43Q96MW1 224 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 FAM210AQ96ND0 272 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 FRG2BQ96QU4 278 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 WDR77Q9BQA1 342 aaPredicted RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 GPATCH1Q9BRR8 931 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 RTKNQ9BST9 563 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 SORBS1Q9BX66 1292 aaKnown RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 EDEM3Q9BZQ6 932 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 KRT23Q9C075 422 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 GHITMQ9H3K2 345 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 C6orf106Q9H6K1 298 aaPredicted RBP3.66□□□□□ -1.82
CDC27-213ENST00000571643 VCPKMTQ9H867 229 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 PREBQ9HCU5 417 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 HAUS2Q9NVX0 235 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 ARL15Q9NXU5 204 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.66□□□□□ -1.82
CDC27-213ENST00000571643 ZNF711Q9Y462 761 aa3.66□□□□□ -1.82
CDC27-213ENST00000571643 MGAMO43451 1857 aa3.65□□□□□ -1.82
CDC27-213ENST00000571643 TRBV5-7A0A0A0MS05 114 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 A0A0D9SFI3 127 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 ATP2A1O14983 1001 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 HNRNPRO43390 633 aaKnown RBP3.65□□□□□ -1.83
CDC27-213ENST00000571643 RGS14O43566 566 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 PRKAB2O43741 272 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 SLC25A27O95847 323 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 ACAA1P09110 424 aaPredicted RBP3.65□□□□□ -1.83
CDC27-213ENST00000571643 SFTPCP11686 197 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 CHMP24386 653 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 CHMLP26374 656 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 PDIA3P30101 505 aaKnown RBP3.65□□□□□ -1.83
CDC27-213ENST00000571643 ART1P52961 327 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 FAM3BP58499 235 aaPredicted RBP3.65□□□□□ -1.83
CDC27-213ENST00000571643 TFAP4Q01664 338 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 Q0VFX4 171 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 TRDNQ13061 729 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 EFR3AQ14156 821 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 KRT32Q14532 448 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 RASA2Q15283 850 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 TAF5Q15542 800 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 PLK5Q496M5 336 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 FAM171A1Q5VUB5 890 aa3.65□□□□□ -1.83
CDC27-213ENST00000571643 C8orf82Q6P1X6 216 aaPredicted RBP3.65□□□□□ -1.83
CDC27-213ENST00000571643 CWC27Q6UX04 472 aaKnown RBP3.65□□□□□ -1.83
CDC27-213ENST00000571643 CCBE1Q6UXH8 406 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms