RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ROPN1LQ96C74 230 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 IMP4Q96G21 291 aaKnown RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 MRGBPQ9NV56 204 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 LEF1Q9UJU2 399 aaPredicted RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 TRIP12Q14669 1992 aaPredicted RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 TBC1D4O60343 1298 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 RPP40O75818 363 aaKnown RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 LRATO95237 230 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 C1RP00736 705 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 MC4RP32245 332 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 MTHFRP42898 656 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 RPL34P49207 117 aaKnown RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 ZNF135P52742 658 aaPredicted RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 IL2P60568 153 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 HMGCS1Q01581 520 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 PRMT9Q6P2P2 845 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 ZNF549Q6P9A3 640 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 ZNF280BQ86YH2 543 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 ZNF385DQ9H6B1 395 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 SCUBE2Q9NQ36 999 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 AASSQ9UDR5 926 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 BAG5Q9UL15 447 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 FER1L6Q2WGJ9 1857 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 AP1G1O43747 822 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 TLR5O60602 858 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 DEAF1O75398 565 aaPredicted RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 RPL26P61254 145 aaKnown RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 MAP2K5Q13163 448 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 ZBED5Q49AG3 693 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 NANOGP8Q6NSW7 305 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 KDELC1Q6UW63 502 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 TICAM1Q8IUC6 712 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 DENND1CQ8IV53 801 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 C2orf69Q8N8R5 385 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 OR56A4Q8NGH8 313 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.2■□□□□ 0.02
USP43-202ENST00000570475 MAELQ96JY0 434 aaKnown RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 PPP1R2P1Q96PQ5 205 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 RTP3Q9BQQ7 232 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 CCSER2Q9H7U1 834 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 NANOGQ9H9S0 305 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 DUS2Q9NX74 493 aaKnown RBP15.2■□□□□ 0.02
USP43-202ENST00000570475 ORC6Q9Y5N6 252 aa15.2■□□□□ 0.02
USP43-202ENST00000570475 A0A1W2PQ67 120 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 CST1P01037 141 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 EFNA1P20827 205 aaPredicted RBP15.19■□□□□ 0.02
USP43-202ENST00000570475 ADRA1AP35348 466 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 CAPGP40121 348 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 OXCT1P55809 520 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 TXNL4AP83876 142 aaKnown RBP15.19■□□□□ 0.02
USP43-202ENST00000570475 OCA2Q04671 838 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 BNIP2Q12982 314 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 APOFQ13790 326 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 DDX39BQ13838 428 aaKnown RBP15.19■□□□□ 0.02
USP43-202ENST00000570475 AP5B1Q2VPB7 878 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 TRIM16LQ309B1 348 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 FAM98BQ52LJ0 330 aaKnown RBP15.19■□□□□ 0.02
USP43-202ENST00000570475 NHSL2Q5HYW2 709 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 MON1AQ86VX9 555 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 DCP1BQ8IZD4 617 aaKnown RBP15.19■□□□□ 0.02
USP43-202ENST00000570475 ITCHQ96J02 903 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 MFSD1Q9H3U5 465 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 TUBB1Q9H4B7 451 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 VPS45Q9NRW7 570 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 MBLAC1A4D2B0 266 aaPredicted RBP15.19■□□□□ 0.02
USP43-202ENST00000570475 SEC22BO75396 215 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 HSPA7P48741 367 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 TUSC3Q13454 348 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 ARHGEF7Q14155 803 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 PGS1Q32NB8 556 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 PABPC1LQ4VXU2 614 aaKnown RBP15.19■□□□□ 0.02
USP43-202ENST00000570475 RAB41Q5JT25 222 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 SYVN1Q86TM6 617 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 OSCP1Q8WVF1 389 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 KATNBL1Q9H079 304 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 WWOXQ9NZC7 414 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 ACTR3BQ9P1U1 418 aa15.19■□□□□ 0.02
USP43-202ENST00000570475 CCNA2P20248 432 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 MAGP20916 626 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 SIM2Q14190 667 aaPredicted RBP15.18■□□□□ 0.02
USP43-202ENST00000570475 GRB14Q14449 540 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 CNTN4Q8IWV2 1026 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 IRGQQ8WZA9 623 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 SGCDQ92629 289 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 GLMNQ92990 594 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 PCDHB9Q9Y5E1 797 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 MUSKO15146 869 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 G6PDP11413 515 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 FCGR1AP12314 374 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 RHOQP17081 205 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 RPL9P32969 192 aaKnown RBP15.18■□□□□ 0.02
USP43-202ENST00000570475 POLD2P49005 469 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 HTR6P50406 440 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 RAD23AP54725 363 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 HUNKP57058 714 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 DUSP4Q13115 394 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 SPIDRQ14159 915 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 CPSF6Q16630 551 aaKnown RBP eCLIP15.18■□□□□ 0.02
USP43-202ENST00000570475 ZNF554Q86TJ5 538 aa15.18■□□□□ 0.02
USP43-202ENST00000570475 SNX29P2Q8IUI4 249 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms