RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 RPL22P35268 128 aaKnown RBP10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 ACTN2P35609 894 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 KCNJ1P48048 391 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 CLCNKAP51800 687 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 ZNF140P52738 457 aaPredicted RBP10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 TMEM115Q12893 351 aaPredicted RBP10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 ITGA9Q13797 1035 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 NR1D2Q14995 579 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 CHST15Q7LFX5 561 aaPredicted RBP10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 ZNF438Q7Z4V0 828 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 LINC00523Q86TU6 105 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 ZNF547Q8IVP9 402 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 ARL14Q8N4G2 192 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 CCDC89Q8N998 374 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 DDHD1Q8NEL9 900 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 OR13C4Q8NGS5 318 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 WDR48Q8TAF3 677 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 ZNF398Q8TD17 642 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 PATE1Q8WXA2 126 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 CCDC74AQ96AQ1 378 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 MS4A14Q96JA4 679 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 RAB6BQ9NRW1 208 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 LRIT1Q9P2V4 623 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 DKK4Q9UBT3 224 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 RNF215Q9Y6U7 377 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 LAMA5O15230 3695 aa10.94□□□□□ -0.66
SHCBP1-207ENST00000569702 CELSR3Q9NYQ7 3312 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 A0A1W2PQM1 296 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 A6NCN8 305 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 MROH6A6NGR9 719 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 H7C0S8 307 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 CES2O00748 559 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 KMOO15229 486 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 SRP72O76094 671 aaKnown RBP10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 PRAMEF1O95521 474 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 EML2O95834 649 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 ACP5P13686 325 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 TPH1P17752 444 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 MSNP26038 577 aaKnown RBP10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 HADHAP40939 763 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 MAZP56270 477 aaKnown RBP10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 CDH17Q12864 832 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 NFATC2Q13469 925 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 POU6F1Q14863 301 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 RTP5Q14D33 572 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 CYP1B1Q16678 543 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 ISXQ2M1V0 245 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 LDLRAP1Q5SW96 308 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 GPRC6AQ5T6X5 926 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 C4orf22Q6V702 233 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 C11orf96Q7Z7L8 435 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 LRRTM4Q86VH4 590 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 SFRP1Q8N474 314 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 OR52K1Q8NGK4 314 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 ACTRT1Q8TDG2 376 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 COG1Q8WTW3 980 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 DEPDC7Q96QD5 511 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 OSBPL9Q96SU4 736 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 NRSN2Q9GZP1 204 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 TBC1D29Q9UFV1 150 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 SLC23A2Q9UGH3 650 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 FKBPLQ9UIM3 349 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 PYCARDQ9ULZ3 195 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 SNX12Q9UMY4 172 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 KCNK6Q9Y257 313 aa10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 ZNF106Q9H2Y7 1883 aaKnown RBP10.93□□□□□ -0.66
SHCBP1-207ENST00000569702 UNC13CQ8NB66 2214 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 E7EVH7 732 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 PPM1DO15297 605 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 B4GAT1O43505 415 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 CSO75390 466 aaKnown RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 APRTP07741 180 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 ZNF7P17097 686 aaPredicted RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 GRIA1P42261 906 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 FASLGP48023 281 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 PDX1P52945 283 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 CCL7P80098 99 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 B4GALNT1Q00973 533 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 TTC27Q6P3X3 843 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 IYDQ6PHW0 289 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 RBM44Q6ZP01 1051 aaKnown RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 SPRED1Q7Z699 444 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 CCNJLQ8IV13 435 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 RASGEF1AQ8N9B8 481 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 GDAP1Q8TB36 358 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 STYXQ8WUJ0 223 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 GRAMD1AQ96CP6 724 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 DNAJC1Q96KC8 554 aaKnown RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 NAP1L3Q99457 506 aaPredicted RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 TIMM29Q9BSF4 260 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 ZCCHC2Q9C0B9 1178 aaKnown RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 LRRN3Q9H3W5 708 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 ASB8Q9H765 288 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 CASS4Q9NQ75 786 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 EIF2B3Q9NR50 452 aaKnown RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 KLC4Q9NSK0 619 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 NLE1Q9NVX2 485 aaPredicted RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 PIH1D1Q9NWS0 290 aaKnown RBP10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 PCDHB1Q9Y5F3 818 aa10.92□□□□□ -0.66
SHCBP1-207ENST00000569702 APC2O95996 2303 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms