RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 BOLA3Q53S33 107 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 ALS2CLQ60I27 953 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 CPZQ66K79 652 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 CAPRIN2Q6IMN6 1127 aaKnown RBP15.27■□□□□ 0.04
PALB2-205ENST00000567003 TMEM26Q6ZUK4 368 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 PHYKPLQ8IUZ5 450 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 ARRDC2Q8TBH0 407 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 CT55Q8WUE5 264 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 BRD8Q9H0E9 1235 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 EPB41L1Q9H4G0 881 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 FAM83DQ9H4H8 585 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 PCDH9Q9HC56 1237 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 RBM22Q9NW64 420 aaKnown RBP eCLIP15.27■□□□□ 0.044e-7■■□□□ 11.6
PALB2-205ENST00000567003 ZNF624Q9P2J8 865 aaPredicted RBP15.27■□□□□ 0.04
PALB2-205ENST00000567003 DNAJC16Q9Y2G8 782 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 CREBBPQ92793 2442 aa15.27■□□□□ 0.03
PALB2-205ENST00000567003 SPAG6O75602 509 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 VIPP01282 170 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 SLC4A1P02730 911 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 SKILP12757 684 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 AMD1P17707 334 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 IL4RP24394 825 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 GARSP41250 739 aaKnown RBP15.26■□□□□ 0.03
PALB2-205ENST00000567003 SLC19A1P41440 591 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 PPP1CAP62136 330 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 CHAF1BQ13112 559 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 DNASE1L3Q13609 305 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 TDRD12Q587J7 1177 aaKnown RBP15.26■□□□□ 0.03
PALB2-205ENST00000567003 ALG1LQ6GMV1 187 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 FAM92BQ6ZTR7 304 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 CPNE8Q86YQ8 564 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 TRIM48Q8IWZ4 208 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 MAML1Q92585 1016 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 CARD9Q9H257 536 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 ZNF768Q9H5H4 540 aaKnown RBP15.26■□□□□ 0.03
PALB2-205ENST00000567003 RMI1Q9H9A7 625 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 PKD2L2Q9NZM6 624 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 CHMP5Q9NZZ3 219 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 ADGRG1Q9Y653 693 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 CACNA1DQ01668 2161 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 ESPL1Q14674 2120 aa15.26■□□□□ 0.03
PALB2-205ENST00000567003 OR5K4A6NMS3 321 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 TTLL8A6PVC2 850 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 PDZK1P1A8MUH7 402 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 VPS4BO75351 444 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 CREG1O75629 220 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 PIRTP0C851 137 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 GZMAP12544 262 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 CASP14P31944 242 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 GJC1P36383 396 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 ZNF165P49910 485 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 RPS18P62269 152 aaKnown RBP15.25■□□□□ 0.03
PALB2-205ENST00000567003 GALNT2Q10471 571 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 GALNT3Q14435 633 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 NADK2Q4G0N4 442 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 CACHD1Q5VU97 1274 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 NCBP2-AS2Q69YL0 99 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 CPT1CQ8TCG5 803 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 TEKT4Q8WW24 435 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 EID2BQ96D98 161 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 LYSMD1Q96S90 227 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 AKIRIN1Q9H9L7 192 aaPredicted RBP15.25■□□□□ 0.03
PALB2-205ENST00000567003 TRIM10Q9UDY6 481 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 DNPEPQ9ULA0 475 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 VPS4AQ9UN37 437 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 HIVEP3Q5T1R4 2406 aa15.25■□□□□ 0.03
PALB2-205ENST00000567003 CRYBG3Q68DQ2 2970 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 A1L4Q6 167 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 LRRC10BA6NIK2 292 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 OR52A4PA6NMU1 304 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 MATN3O15232 486 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 SEMA7AO75326 666 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 MTX2O75431 263 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 MMP2P08253 660 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 BRAFP15056 766 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 XRCC1P18887 633 aaPredicted RBP15.24■□□□□ 0.03
PALB2-205ENST00000567003 RPL10P27635 214 aaKnown RBP15.24■□□□□ 0.03
PALB2-205ENST00000567003 CD86P42081 329 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 CAPZBP47756 277 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 KCNAB1Q14722 419 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 INSCQ1MX18 579 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 ATP13A4Q4VNC1 1196 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 ZNF569Q5MCW4 686 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 FHL5Q5TD97 284 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 IRGCQ6NXR0 463 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 RBM43Q6ZSC3 357 aaKnown RBP15.24■□□□□ 0.03
PALB2-205ENST00000567003 ADGRG6Q86SQ4 1221 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 AOPEPQ8N6M6 819 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 EFCAB3Q8N7B9 438 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 SPATA16Q9BXB7 569 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 ACTL8Q9H568 366 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 UCK1Q9HA47 277 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 MRPL47Q9HD33 250 aaKnown RBP15.24■□□□□ 0.03
PALB2-205ENST00000567003 LHX9Q9NQ69 397 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 LMBRD1Q9NUN5 540 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 KCND3Q9UK17 655 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 MYO6Q9UM54 1294 aa15.24■□□□□ 0.03
PALB2-205ENST00000567003 CELSR2Q9HCU4 2923 aa15.23■□□□□ 0.03
PALB2-205ENST00000567003 MTA2O94776 668 aa15.23■□□□□ 0.03
PALB2-205ENST00000567003 SLC25A14O95258 325 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms