RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 MYO1HQ8N1T3 1032 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 BBS5Q8N3I7 341 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TNIP2Q8NFZ5 429 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 ADAMTS16Q8TE57 1224 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 SH3RF2Q8TEC5 729 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 GFM2Q969S9 779 aaKnown RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 LRRC58Q96CX6 371 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 MYRFLQ96LU7 910 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TRIB3Q96RU7 358 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 C9orf16Q9BUW7 83 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 HERC2P3Q9BVR0 1158 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TUBB1Q9H4B7 451 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 TAS2R13Q9NYV9 303 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 RSL24D1Q9UHA3 163 aaKnown RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 AFF4Q9UHB7 1163 aaKnown RBP16.65■□□□□ 0.26
CMTM3-213ENST00000566756 POLG2Q9UHN1 485 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 VPS9D1Q9Y2B5 631 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 PCDHA9Q9Y5H5 950 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 GPR45Q9Y5Y3 372 aa16.65■□□□□ 0.26
CMTM3-213ENST00000566756 A0A1W2PP18 115 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 TRIM64A6NGJ6 449 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 CCL22O00626 93 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ADAM12O43184 909 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ABLIM3O94929 683 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ZDHHC11BP0C7U3 371 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SPATA31D3P0C874 917 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 UMPSP11172 480 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 GFAPP14136 432 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 MYF6P23409 242 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SLC6A2P23975 617 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 FASP25445 335 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 TAF10Q12962 218 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 BIRC2Q13490 618 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SEMA3AQ14563 771 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 CYTH1Q15438 398 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 GEN1Q17RS7 908 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 TBCELQ5QJ74 424 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 RAP1GAP2Q684P5 730 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ANKS6Q68DC2 871 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SPATA31D4Q6ZUB0 917 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ERI1Q8IV48 349 aaKnown RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 FBXO39Q8N4B4 442 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ZNF461Q8TAF7 563 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 BLOC1S5Q8TDH9 187 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 TUBGCP3Q96CW5 907 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 CENPNQ96H22 339 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 CDKN2AIPNLQ96HQ2 116 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 CLSTN3Q9BQT9 956 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SLC39A3Q9BRY0 314 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 IL23AQ9NPF7 189 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 MARCH2Q9P0N8 246 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ARL5AQ9Y689 179 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 A0A1B0GVG6 124 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 GRXCR2A6NFK2 248 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SLC38A8A6NNN8 435 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 H3BMM5 538 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ZNF701M0R085 212 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 TRMUO75648 421 aaKnown RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SOAT2O75908 522 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SIX3O95343 332 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 NPPAP01160 153 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 HGFP14210 728 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ATF6P18850 670 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 OR1E1P30953 314 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 RAD51Q06609 339 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 GRB7Q14451 532 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 RPS6KA2Q15349 733 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 VPS26BQ4G0F5 336 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 AFTPHQ6ULP2 937 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 DDX53Q86TM3 631 aaKnown RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 DDIASQ8IXT1 998 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 FIBCD1Q8N539 461 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 NKAPQ8N5F7 415 aaKnown RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 PAPD5Q8NDF8 572 aaKnown RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 RPRD1AQ96P16 312 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 MGME1Q9BQP7 344 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 CD320Q9NPF0 282 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 CMTM6Q9NX76 183 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 SPG21Q9NZD8 308 aa16.64■□□□□ 0.25
CMTM3-213ENST00000566756 ARIH1Q9Y4X5 557 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
CMTM3-213ENST00000566756 MYOCOSA0A1B0GUC4 107 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 SOCS2O14508 198 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 MLYCDO95822 493 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 MT-CO1P00395 513 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 SLC5A2P31639 672 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 ZNF140P52738 457 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-213ENST00000566756 FOXA1P55317 472 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 RCAN2Q14206 197 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 LRRC23Q53EV4 343 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-213ENST00000566756 PRR23BQ6ZRT6 265 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 SPRED1Q7Z699 444 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 RYBPQ8N488 228 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-213ENST00000566756 PNPLA1Q8N8W4 532 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 TRPV3Q8NET8 790 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 OR13C4Q8NGS5 318 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 GPR152Q8TDT2 470 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 OVCA2Q8WZ82 227 aa16.63■□□□□ 0.25
CMTM3-213ENST00000566756 BIRC8Q96P09 236 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms