RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PHF12Q96QT6 1004 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 SLC25A13Q9UJS0 675 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 USP22Q9UPT9 525 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 CNTN6Q9UQ52 1028 aa3.34□□□□□ -1.88
CHD9-213ENST00000564845 PLXNA1Q9UIW2 1896 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 COL4A3Q01955 1670 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 FAM92AA1XBS5 289 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 BTNL10A8MVZ5 291 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 YKT6O15498 198 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CLOCKO15516 846 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PROM1O43490 865 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 HYAL3O43820 417 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 B3GALNT1O75752 331 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ITGAVP06756 1048 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PROZP22891 400 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PRDX6P30041 224 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 STK19P49842 368 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 TAF6P49848 677 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC20A2Q08357 652 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 DMC1Q14565 340 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RFTN1Q14699 578 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 ZNHIT3Q15649 155 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 PPP1R3AQ16821 1122 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 HSF5Q4G112 596 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 MORN1Q5T089 497 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 WLSQ5T9L3 541 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CNSTQ6PJW8 725 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ARL14EPQ8N8R7 260 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 IGSF8Q969P0 613 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 OTULINQ96BN8 352 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ERP27Q96DN0 273 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 HMCESQ96FZ2 354 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ING2Q9H160 280 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 UNKLQ9H9P5 680 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 GPAMQ9HCL2 828 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 LTB4R2Q9NPC1 389 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ENTPD7Q9NQZ7 604 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PFDN2Q9UHV9 154 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SCML1Q9UN30 329 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 BAIAP2Q9UQB8 552 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 DLGAP4Q9Y2H0 992 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TET1Q8NFU7 2136 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 EPHA3P29320 983 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TLX1P31314 330 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 CSRP3P50461 194 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 YWHAZP63104 245 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 PFKPQ01813 784 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 GPNMBQ14956 572 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 AP5B1Q2VPB7 878 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TRMT5Q32P41 509 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 MACC1Q6ZN28 852 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 MBOAT1Q6ZNC8 495 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SPATA2LQ8IUW3 424 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 C10orf107Q8IVU9 208 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PSD4Q8NDX1 1056 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC26A7Q8TE54 656 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ATXN2LQ8WWM7 1075 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLAMF9Q96A28 289 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 UGT2B28Q9BY64 529 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLITRK2Q9H156 845 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 EPB41L1Q9H4G0 881 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 LRRC40Q9H9A6 602 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SAR1AQ9NR31 198 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CALML5Q9NZT1 146 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PAIP2BQ9ULR5 123 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 UBQLN1Q9UMX0 589 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 NCKAP1Q9Y2A7 1128 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 NCANO14594 1321 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 PLXNB2O15031 1838 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 HIDE1A8MVS5 230 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 MUSKO15146 869 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 F2P00734 622 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RPL9P32969 192 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 PBX2P40425 430 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CTSOP43234 321 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 PCYT1AP49585 367 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 DGKEP52429 567 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 NRG1Q02297 640 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 CHI3L2Q15782 390 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 FAM110CQ1W6H9 321 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CATSPEREQ5SY80 951 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SLC9A9Q8IVB4 645 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CLYBLQ8N0X4 340 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 SDR16C5Q8N3Y7 309 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 ALLCQ8N6M5 410 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 RASGEF1AQ8N9B8 481 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 JPH3Q8WXH2 748 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 ADAM28Q9UKQ2 775 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CCL26Q9Y258 94 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CHKBQ9Y259 395 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TNFSF13BQ9Y275 285 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TRIM64A6NGJ6 449 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 TRAFD1O14545 582 aaPredicted RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 MTRF1O75570 445 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 WDR47O94967 919 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CNPP09543 421 aaKnown RBP3.33□□□□□ -1.88
CHD9-213ENST00000564845 ICAM3P32942 547 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 OR1D2P34982 312 aa3.33□□□□□ -1.88
CHD9-213ENST00000564845 CD86P42081 329 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms