RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 HOOK3Q86VS8 718 aa15.81■□□□□ 0.12
RAB40C-208ENST00000564703 FAM46DQ8NEK8 389 aa15.81■□□□□ 0.12
RAB40C-208ENST00000564703 PTCD2Q8WV60 388 aaKnown RBP15.81■□□□□ 0.12
RAB40C-208ENST00000564703 HDAC10Q969S8 669 aa15.81■□□□□ 0.12
RAB40C-208ENST00000564703 TRIM31Q9BZY9 425 aa15.81■□□□□ 0.12
RAB40C-208ENST00000564703 CLPBQ9H078 707 aa15.81■□□□□ 0.12
RAB40C-208ENST00000564703 DPEP2Q9H4A9 486 aa15.81■□□□□ 0.12
RAB40C-208ENST00000564703 ANAPC5Q9UJX4 755 aa15.81■□□□□ 0.12
RAB40C-208ENST00000564703 OAS3Q9Y6K5 1087 aaKnown RBP15.81■□□□□ 0.12
RAB40C-208ENST00000564703 TRIM38O00635 465 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 KMOO15229 486 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 DNAJC6O75061 913 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 CBFA2T3O75081 653 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 AVILO75366 819 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 ZNF8P17098 575 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-208ENST00000564703 CKMT2P17540 419 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 CRADDP78560 199 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 SIM1P81133 766 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-208ENST00000564703 CTBSQ01459 385 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 PPM1JQ5JR12 505 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 GPRC6AQ5T6X5 926 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 RNASEH2BQ5TBB1 312 aaKnown RBP15.8■□□□□ 0.12
RAB40C-208ENST00000564703 LRRTM4Q86VH4 590 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 NAT8LQ8N9F0 302 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 DDHD1Q8NEL9 900 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 GPBAR1Q8TDU6 330 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 SNF8Q96H20 258 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 COPS8Q99627 209 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 TRIM51Q9BSJ1 452 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 FAM96AQ9H5X1 160 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 CAAP1Q9H8G2 361 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 SMOXQ9NWM0 555 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 GULP1Q9UBP9 304 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 GPR34Q9UPC5 381 aa15.8■□□□□ 0.12
RAB40C-208ENST00000564703 APOBEC2Q9Y235 224 aaKnown RBP15.8■□□□□ 0.12
RAB40C-208ENST00000564703 UTP11Q9Y3A2 253 aaKnown RBP15.8■□□□□ 0.12
RAB40C-208ENST00000564703 SPAARA0A1B0GVQ0 90 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 GAPDHSO14556 408 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-208ENST00000564703 TMEM63AO94886 807 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 VCLP18206 1134 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 PAMP19021 973 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 PSMA3P25788 255 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 ACTR1BP42025 376 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 ACTR1AP61163 376 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 CALCOCO2Q13137 446 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 MORF4L2Q15014 288 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 FASTKD1Q53R41 847 aaKnown RBP15.79■□□□□ 0.12
RAB40C-208ENST00000564703 LYPLAL1Q5VWZ2 237 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 KCTD16Q68DU8 428 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 AFTPHQ6ULP2 937 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 GLRX5Q86SX6 157 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 CAND1Q86VP6 1230 aaKnown RBP15.79■□□□□ 0.12
RAB40C-208ENST00000564703 NXPE1Q8N323 547 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 FAM181AQ8N9Y4 354 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 OR4L1Q8NH43 312 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 ZNF514Q96K75 400 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-208ENST00000564703 SERPINB12Q96P63 405 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 KIFC1Q9BW19 673 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 MRM3Q9HC36 420 aaKnown RBP15.79■□□□□ 0.12
RAB40C-208ENST00000564703 SYBUQ9NX95 663 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 SLC2A6Q9UGQ3 507 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 TMPRSS11EQ9UL52 423 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 SOX13Q9UN79 622 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 PRKAB1Q9Y478 270 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 MAD1L1Q9Y6D9 718 aa15.79■□□□□ 0.12
RAB40C-208ENST00000564703 ARID1BQ8NFD5 2236 aaPredicted RBP15.78■□□□□ 0.12
RAB40C-208ENST00000564703 LAMA1P25391 3075 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CCDC162PA2VCL2 907 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 AGAP14A8MT82 685 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 GIPC1O14908 333 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CHUKO15111 745 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 GOT2P00505 430 aaKnown RBP15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CELA2BP08218 269 aaPredicted RBP15.78■□□□□ 0.12
RAB40C-208ENST00000564703 GIMD1P0DJR0 217 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 ACP5P13686 325 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 IVDP26440 423 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 BIRC2Q13490 618 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 NR0B2Q15466 257 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 INSCQ1MX18 579 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CCDC157Q569K6 752 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 DNAJC21Q5F1R6 531 aaKnown RBP15.78■□□□□ 0.12
RAB40C-208ENST00000564703 C6orf132Q5T0Z8 1188 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 SLC30A9Q6PML9 568 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 TMEM220Q6QAJ8 160 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CRTC3Q6UUV7 619 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CERS6Q6ZMG9 384 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 ZNF534Q76KX8 674 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 ZNF572Q7Z3I7 529 aaPredicted RBP15.78■□□□□ 0.12
RAB40C-208ENST00000564703 SERPINA9Q86WD7 417 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 TRAPPC5Q8IUR0 188 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 PDIK1LQ8N165 341 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 OR13J1Q8NGT2 312 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CCL4L1Q8NHW4 92 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 APOLD1Q96LR9 279 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 ZNF778Q96MU6 729 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 ERP44Q9BS26 406 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 RAB17Q9H0T7 212 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 ZDHHC3Q9NYG2 299 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 SIRPGQ9P1W8 387 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 SNX24Q9Y343 169 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms