RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 C18orf63Q68DL7 685 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 BRAT1Q6PJG6 821 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 GPR180Q86V85 440 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 FBXL14Q8N1E6 418 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 CLIP4Q8N3C7 705 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 EMC1Q8N766 993 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 POGLUT1Q8NBL1 392 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 PTPMT1Q8WUK0 201 aaPredicted RBP4.63□□□□□ -1.67
LINC00560-201ENST00000564593 DNAAF4Q8WXU2 420 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF622Q969S3 477 aaKnown RBP eCLIP4.63□□□□□ -1.67
LINC00560-201ENST00000564593 C3orf30Q96M34 536 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 DACH2Q96NX9 599 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 OR1F2PQ96R84 312 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 CDRT15Q96T59 188 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 MTERF1Q99551 399 aaKnown RBP4.63□□□□□ -1.67
LINC00560-201ENST00000564593 NTPCRQ9BSD7 190 aaKnown RBP4.63□□□□□ -1.67
LINC00560-201ENST00000564593 RAD21L1Q9H4I0 556 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 PCDH9Q9HC56 1237 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 CFDP1Q9UEE9 299 aaPredicted RBP4.63□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF148Q9UQR1 794 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 PCDHGA5Q9Y5G8 931 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 TRPV2Q9Y5S1 764 aa4.63□□□□□ -1.67
LINC00560-201ENST00000564593 TMEM8BA6NDV4 472 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 ANKRD28O15084 1053 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 DKC1O60832 514 aaKnown RBP eCLIP4.62□□□□□ -1.67
LINC00560-201ENST00000564593 RFPL2O75678 378 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 OAZ2O95190 189 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 BMP15O95972 392 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 ABCB1P08183 1280 aaPredicted RBP4.62□□□□□ -1.67
LINC00560-201ENST00000564593 PEX5P50542 639 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 ARSEP51690 589 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 KRTAP10-9P60411 292 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 PDE1BQ01064 536 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 MEP1AQ16819 746 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 ADALQ6DHV7 355 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 AWAT2Q6E213 333 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 TPRG1Q6ZUI0 275 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF34Q8IZ26 560 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 ACVR1CQ8NER5 493 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 TMED6Q8WW62 240 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 PTERQ96BW5 349 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 SCMH1Q96GD3 660 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 BAG1Q99933 345 aaPredicted RBP4.62□□□□□ -1.67
LINC00560-201ENST00000564593 OCIAD1Q9NX40 245 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 TRMT1Q9NXH9 659 aaKnown RBP4.62□□□□□ -1.67
LINC00560-201ENST00000564593 MCM9Q9NXL9 1143 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 TAS2R14Q9NYV8 317 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 C1RLQ9NZP8 487 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 HACL1Q9UJ83 578 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 PADI3Q9ULW8 664 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF711Q9Y462 761 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 NFS1Q9Y697 457 aa4.62□□□□□ -1.67
LINC00560-201ENST00000564593 GPR75-ASB3A0A0A6YYF3 556 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 UBE2CO00762 179 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 ZWINTO95229 277 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CLDN14O95500 239 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 HRH2P25021 359 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 MATR3P43243 847 aaKnown RBP eCLIP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CAPZA2P47755 286 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 KRTAP10-11P60412 298 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 MYBPHQ13203 477 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CALCRLQ16602 461 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 SYT16Q17RD7 645 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 PDXDC1Q6P996 788 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 RHBDF2Q6PJF5 856 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CCNI2Q6ZMN8 369 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 GLCCI1Q86VQ1 547 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CEP97Q8IW35 865 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 GUF1Q8N442 669 aaKnown RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 UTP15Q8TED0 518 aaKnown RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 MIB2Q96AX9 1013 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 RADILQ96JH8 1075 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CNDP2Q96KP4 475 aaKnown RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 DGAT2Q96PD7 388 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CCDC106Q9BWC9 280 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 SEZ6LQ9BYH1 1024 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 SPATC1LQ9H0A9 340 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 MMP27Q9H306 513 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 KCNK15Q9H427 330 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 TSPYL4Q9UJ04 414 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 B3GALT5Q9Y2C3 310 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 MYO15BQ96JP2 1530 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 KRTAP29-1A8MX34 341 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CLGNO14967 610 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 ZBTB43O43298 467 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 ZNF217O75362 1048 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 BCL10O95999 233 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 APOA4P06727 396 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 NMBRP28336 390 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 CLDN20P56880 219 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 MVPQ14764 893 aaKnown RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 FAM98BQ52LJ0 330 aaKnown RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 C9orf152Q5JTZ5 239 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 ERMARDQ5T6L9 678 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 ZDHHC20Q5W0Z9 365 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 DHRS7BQ6IAN0 325 aaPredicted RBP4.61□□□□□ -1.67
LINC00560-201ENST00000564593 FAM122CQ6P4D5 195 aa4.61□□□□□ -1.67
LINC00560-201ENST00000564593 INTS8Q75QN2 995 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms