RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 UGT1A6P19224 532 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 LPOP22079 712 aaPredicted RBP30.36■■■□□ 2.45
CMTM4-204ENST00000563952 UGT1A1P22309 533 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 UGT1A4P22310 534 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 UGT1A3P35503 534 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 UGT1A5P35504 534 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 TAF1AQ15573 450 aaPredicted RBP30.36■■■□□ 2.45
CMTM4-204ENST00000563952 MAP9Q49MG5 647 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 SLC37A2Q8TED4 501 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 HNRNPLLQ8WVV9 542 aaKnown RBP30.36■■■□□ 2.45
CMTM4-204ENST00000563952 FGF11Q92914 225 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 TMEM74Q96NL1 305 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 OSGEPL1Q9H4B0 414 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 UGT1A7Q9HAW7 530 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 UGT1A10Q9HAW8 530 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 UGT1A8Q9HAW9 530 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 KLC4Q9NSK0 619 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 KCTD3Q9Y597 815 aa30.36■■■□□ 2.45
CMTM4-204ENST00000563952 ANKRD11Q6UB99 2663 aaPredicted RBP30.36■■■□□ 2.45
CMTM4-204ENST00000563952 KIF26BQ2KJY2 2108 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 UNC13CQ8NB66 2214 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 CCDC187A0A096LP49 1063 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 CHUKO15111 745 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 ZW10O43264 779 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 PPFIA2O75334 1257 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 INSCQ1MX18 579 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 LRRTM4Q86VH4 590 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 WDR36Q8NI36 951 aaKnown RBP30.35■■■□□ 2.45
CMTM4-204ENST00000563952 STRADBQ9C0K7 418 aa30.35■■■□□ 2.45
CMTM4-204ENST00000563952 TMX2-CTNND1H3BSU7 103 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 LIASO43766 372 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 RBMS1P29558 406 aaKnown RBP30.34■■■□□ 2.45
CMTM4-204ENST00000563952 GTF2H3Q13889 308 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 NR1D2Q14995 579 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 P3H1Q32P28 736 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 USP53Q70EK8 1073 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 SFRP1Q8N474 314 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 OR4K2Q8NGD2 314 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 DTX3LQ8TDB6 740 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 C1orf54Q8WWF1 131 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 TTC25Q96NG3 672 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 RDH14Q9HBH5 336 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 PPP2R2CQ9Y2T4 447 aa30.34■■■□□ 2.45
CMTM4-204ENST00000563952 URB1O60287 2271 aaKnown RBP30.34■■■□□ 2.45
CMTM4-204ENST00000563952 AGRPO00253 132 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 GAPDHSO14556 408 aaPredicted RBP30.33■■■□□ 2.45
CMTM4-204ENST00000563952 KMOO15229 486 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 CRTAMO95727 393 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 GPR3P46089 330 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 TMEM115Q12893 351 aaPredicted RBP30.33■■■□□ 2.45
CMTM4-204ENST00000563952 ITGA9Q13797 1035 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 DENND5AQ6IQ26 1287 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 ZNF761Q86XN6 746 aaPredicted RBP30.33■■■□□ 2.45
CMTM4-204ENST00000563952 SNIP1Q8TAD8 396 aaKnown RBP30.33■■■□□ 2.45
CMTM4-204ENST00000563952 BRSK1Q8TDC3 778 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 LIN37Q96GY3 246 aaPredicted RBP30.33■■■□□ 2.45
CMTM4-204ENST00000563952 ZNF578Q96N58 590 aaPredicted RBP30.33■■■□□ 2.45
CMTM4-204ENST00000563952 PRDM8Q9NQV8 689 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 KCNK4Q9NYG8 393 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 SLC23A2Q9UGH3 650 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 DNAJC16Q9Y2G8 782 aa30.33■■■□□ 2.45
CMTM4-204ENST00000563952 PKD1L2Q7Z442 2459 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 DXOO77932 396 aaKnown RBP30.32■■■□□ 2.44
CMTM4-204ENST00000563952 ZNF7P17097 686 aaPredicted RBP30.32■■■□□ 2.44
CMTM4-204ENST00000563952 CCKBRP32239 447 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 CA5AP35218 305 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 EIF2S3P41091 472 aaKnown RBP30.32■■■□□ 2.44
CMTM4-204ENST00000563952 SNX1Q13596 522 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 NKAIN2Q5VXU1 208 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 KCTD11Q693B1 232 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 IYDQ6PHW0 289 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 TMPRSS9Q7Z410 1059 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 PIM3Q86V86 326 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 TRAPPC5Q8IUR0 188 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 ZNF547Q8IVP9 402 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 KLHDC8BQ8IXV7 354 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 FRMD8P1Q9BZ68 369 aaPredicted RBP30.32■■■□□ 2.44
CMTM4-204ENST00000563952 LRRC40Q9H9A6 602 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 FKBPLQ9UIM3 349 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 ZNF148Q9UQR1 794 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 PCDHGA8Q9Y5G5 932 aa30.32■■■□□ 2.44
CMTM4-204ENST00000563952 ZNF106Q9H2Y7 1883 aaKnown RBP30.31■■■□□ 2.44
CMTM4-204ENST00000563952 A0A087WV48 116 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 GOLGA6L3A6NEY3 463 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 PRAMEF1O95521 474 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 CPNE6O95741 557 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 F3P13726 295 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 SLC2A4P14672 509 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 FASLGP48023 281 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 PPM1FP49593 454 aaPredicted RBP30.31■■■□□ 2.44
CMTM4-204ENST00000563952 TMPRSS15P98073 1019 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 MSLNQ13421 630 aaPredicted RBP30.31■■■□□ 2.44
CMTM4-204ENST00000563952 LDLRAP1Q5SW96 308 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 PHF19Q5T6S3 580 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 RAB11FIP2Q7L804 512 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 TRIM58Q8NG06 486 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 ZNF398Q8TD17 642 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 PRR11Q96HE9 360 aaPredicted RBP30.31■■■□□ 2.44
CMTM4-204ENST00000563952 SLC38A3Q99624 504 aa30.31■■■□□ 2.44
CMTM4-204ENST00000563952 NUDT22Q9BRQ3 303 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms