RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 PRSS55Q6UWB4 352 aaPredicted RBP10.39□□□□□ -0.75
RNF40-204ENST00000563683 LYSMD3Q7Z3D4 306 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 C3orf58Q8NDZ4 430 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 ISL2Q96A47 359 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 SLC29A1Q99808 456 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 NEURL2Q9BR09 285 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 GKN1Q9NS71 199 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 RGS17Q9UGC6 210 aaPredicted RBP10.39□□□□□ -0.75
RNF40-204ENST00000563683 DHRS12A0PJE2 317 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 FUCA1P04066 466 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 BMP2P12643 396 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 MYF6P23409 242 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 IGFBP6P24592 240 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 CD68P34810 354 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 KCNQ1P51787 676 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 AFTPHQ6ULP2 937 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ANKS3Q6ZW76 656 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ZBTB46Q86UZ6 589 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 DHRSXQ8N5I4 330 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CDK5RAP1Q96SZ6 601 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 TTPALQ9BTX7 342 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 KIFC1Q9BW19 673 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 NPLQ9BXD5 320 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 ZNF385DQ9H6B1 395 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CCSER2Q9H7U1 834 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 NMUR1Q9HB89 426 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 FBRSL1Q9HCM7 1045 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 TMLHEQ9NVH6 421 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 GIMAP2Q9UG22 337 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ZFP37Q9Y6Q3 630 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 ZCWPW2A0A1B0GU75 182 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PIP5K1BO14986 540 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 SLC7A4O43246 635 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ADAM23O75077 832 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 MAGEA12P43365 314 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 YBEYP58557 167 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 OCA2Q04671 838 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 VAC14Q08AM6 782 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PARP15Q460N3 678 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 OGFOD2Q6N063 350 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 XKR5Q6UX68 686 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CCDC81Q6ZN84 652 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 GPRIN3Q6ZVF9 776 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 LRRTM3Q86VH5 581 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CEP97Q8IW35 865 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 MFSD2AQ8NA29 543 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 SH3KBP1Q96B97 665 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PPM1MQ96MI6 270 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 TUBA1CQ9BQE3 449 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 WDR6Q9NNW5 1121 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 OPTCQ9UBM4 332 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 RAI2Q9Y5P3 530 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 A0A1W2PPW3 197 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 TCRBV3S1A0A5B6 114 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 F8W810 466 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CPSF4O95639 269 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 BCL10O95999 233 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 HAPLN1P10915 354 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 PKMP14618 531 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 CCNA2P20248 432 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 JAK1P23458 1154 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CORO1AP31146 461 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 NRG1Q02297 640 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 CPSF6Q16630 551 aaKnown RBP eCLIP10.38□□□□□ -0.75
RNF40-204ENST00000563683 SIRPB2Q5JXA9 342 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PRMT9Q6P2P2 845 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PAQR3Q6TCH7 311 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ABRAXAS1Q6UWZ7 409 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CENPLQ8N0S6 344 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 TXNDC5Q8NBS9 432 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 ACVR1CQ8NER5 493 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ZMIZ2Q8NF64 920 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 GANCQ8TET4 914 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 FAM120BQ96EK7 910 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 CNDP2Q96KP4 475 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 SUSD3Q96L08 255 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 BDH2Q9BUT1 245 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 TDRD1Q9BXT4 1180 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 CIPCQ9C0C6 399 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.38□□□□□ -0.75
RNF40-204ENST00000563683 POLR1BQ9H9Y6 1135 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CD320Q9NPF0 282 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ARL15Q9NXU5 204 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 FLRT1Q9NZU1 646 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CNOT6Q9ULM6 557 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 ERGIC3Q9Y282 383 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 TCAF2A6NFQ2 919 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 OR6C75A6NL08 312 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ITGB1P05556 798 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 SLC35E2BP0CK96 405 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PBLDP30039 288 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 SEMG2Q02383 582 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PRKCQQ04759 706 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CLCQ05315 142 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 LRRC74AQ0VAA2 488 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 PRKG2Q13237 762 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 REP15Q6BDI9 236 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 NANOGP8Q6NSW7 305 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 CHSY3Q70JA7 882 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms