RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 SLC9A8Q9Y2E8 581 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CSADQ9Y600 493 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 A3GALT2U3KPV4 340 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CCDC88AQ3V6T2 1871 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 hCG_1818297A0A087WSY0 165 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 SLC16A4O15374 487 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 VPS26AO75436 327 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MAP2K3P46734 347 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 DBPQ10586 325 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 TMEM44Q2T9K0 475 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 XRRA1Q6P2D8 792 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ADAMTSL2Q86TH1 951 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 TERB2Q8NHR7 220 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 POP1Q99575 1024 aaKnown RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 OCEL1Q9H607 264 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CHST12Q9NRB3 414 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 NOD1Q9Y239 953 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CA5BQ9Y2D0 317 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 COL15A1P39059 1388 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ADAMTS13Q76LX8 1427 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 RGS14O43566 566 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CHP2O43745 196 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 AVPR1AP37288 418 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MARCKSL1P49006 195 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 GEMP55040 296 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 TSPAN5P62079 268 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 NCS1P62166 190 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 LIPEQ05469 1076 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 HIST2H2ACQ16777 129 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 KLHL26Q53HC5 615 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 KHDRBS2Q5VWX1 349 aaKnown RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 DNAJB14Q8TBM8 379 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 HSFY1Q96LI6 401 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 LRRC3Q9BY71 257 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 SMURF2Q9HAU4 748 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MFHAS1Q9Y4C4 1052 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 GATCO43716 136 aaKnown RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 MITFO75030 526 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 LTA4HP09960 611 aaKnown RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 EFNA5P52803 228 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 SP4Q02446 784 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ILF3Q12906 894 aaKnown RBP eCLIP6.22□□□□□ -1.41
CLK3-212ENST00000563418 NR6A1Q15406 480 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CCNJQ5T5M9 372 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ATG9AQ7Z3C6 839 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 KIAA1257Q9ULG3 409 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MAU2Q9Y6X3 613 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 PREX1Q8TCU6 1659 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 FTH1P02794 183 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CDK1P06493 297 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 SPARCP09486 303 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CTRB1P17538 263 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 PLA2G16P53816 162 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CTBP2P56545 445 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 SF3B4Q15427 424 aaKnown RBP eCLIP6.22□□□□□ -1.416e-6■□□□□ 11
CLK3-212ENST00000563418 CRY1Q16526 586 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CTRB2Q6GPI1 263 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 HACD2Q6Y1H2 254 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MSANTD1Q6ZTZ1 278 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 LAPTM4BQ86VI4 370 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CARM1Q86X55 608 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 OR4A15Q8NGL6 344 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 OR6Q1Q8NGQ2 317 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 SLC29A1Q99808 456 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 IFT27Q9BW83 186 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 GREM2Q9H772 168 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 RNF121Q9H920 327 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 POLE4Q9NR33 117 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 SIRPGQ9P1W8 387 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 RIMKLBQ9ULI2 386 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ATRNO75882 1429 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MCIDASD6RGH6 385 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 GMPSP49915 693 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 GPR85P60893 370 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 FGL1Q08830 312 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MAMLD1Q13495 774 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MTMR2Q13614 643 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ELOAQ14241 798 aaKnown RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 ZBTB6Q15916 424 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 OTOP3Q7RTS5 596 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ZDHHC17Q8IUH5 632 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 TRPV3Q8NET8 790 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 RHOXF1Q8NHV9 184 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 HTR3CQ8WXA8 447 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 LGALS12Q96DT0 336 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 FAM167AQ96KS9 214 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 KCNS3Q9BQ31 491 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 FEM1AQ9BSK4 669 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 C2orf40Q9H1Z8 148 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ADAM7Q9H2U9 754 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 NXF3Q9H4D5 531 aaKnown RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 TOPORSQ9NS56 1045 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 LOC100130705A0A1B0GUX0 176 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 JRKO75564 520 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 FABP3P05413 133 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ALAS1P13196 640 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 UBA1P22314 1058 aaKnown RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 RAB10P61026 200 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 TCEAL1Q15170 157 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 USP39Q53GS9 565 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms