RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 TUBGCP3Q96CW5 907 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 LRRC58Q96CX6 371 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 RDH12Q96NR8 316 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 RPRD1AQ96P16 312 aaPredicted RBP7.44□□□□□ -1.22
CFDP1-202ENST00000562602 TRIB3Q96RU7 358 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 ATOH8Q96SQ7 321 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 SEMA3CQ99985 751 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 TUBA1CQ9BQE3 449 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 MGME1Q9BQP7 344 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 BDH2Q9BUT1 245 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 ADGRE3Q9BY15 652 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 SEZ6LQ9BYH1 1024 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 BRINP2Q9C0B6 783 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 RBM38Q9H0Z9 239 aaKnown RBP7.44□□□□□ -1.22
CFDP1-202ENST00000562602 NMUR1Q9HB89 426 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 MID1IP1Q9NPA3 183 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 ENAMQ9NRM1 1142 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.44□□□□□ -1.22
CFDP1-202ENST00000562602 ABI2Q9NYB9 513 aaPredicted RBP7.44□□□□□ -1.22
CFDP1-202ENST00000562602 MPP6Q9NZW5 540 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 POLG2Q9UHN1 485 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 HCN2Q9UL51 889 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 CNOT6Q9ULM6 557 aaKnown RBP7.44□□□□□ -1.22
CFDP1-202ENST00000562602 DOLKQ9UPQ8 538 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 NOD1Q9Y239 953 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 DNAJC15Q9Y5T4 150 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 GMEB1Q9Y692 573 aa7.44□□□□□ -1.22
CFDP1-202ENST00000562602 RNF103-CHMP3A0A140T963 221 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 FAM234BA2RU67 622 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 NEMP2A6NFY4 417 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 TRIM64CA6NLI5 447 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 SUPT3HB4E1H0 165 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 H0YAE9 185 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 J3KR12 359 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 UBXN8O00124 270 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 NR5A2O00482 541 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 SNX2O60749 519 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 SUPT3HO75486 399 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 CLDN11O75508 207 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 SLC22A3O75751 556 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 RASAL1O95294 804 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 CELF2O95319 508 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PGM3O95394 542 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 S100BP04271 92 aaPredicted RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 CYBBP04839 570 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 RPS17P08708 135 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 F7P08709 466 aaPredicted RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 CTSHP09668 335 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 CYBAP13498 195 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 HGFP14210 728 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ATP6V1B1P15313 513 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 TCN1P20061 433 aaPredicted RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 MSH3P20585 1137 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 KCNA5P22460 613 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 HTR1EP28566 365 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 GRIA3P42263 894 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 RABGGTBP53611 331 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ERVK-8P63133 956 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PRKCQQ04759 706 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 DSC1Q08554 894 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 EFEMP1Q12805 493 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 DCTN2Q13561 401 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 RCAN2Q14206 197 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 LPIN1Q14693 890 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PFKFB4Q16877 469 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ZBED5Q49AG3 693 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 NHSL2Q5HYW2 709 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 NOMO2Q5JPE7 1267 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 C10orf120Q5SQS8 335 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 C6orf10Q5SRN2 563 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ABRAXAS1Q6UWZ7 409 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 CERS6Q6ZMG9 384 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ZNF783Q6ZMS7 281 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 RNF165Q6ZSG1 346 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 KDELC2Q7Z4H8 507 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 GPR141Q7Z602 305 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 SPRED1Q7Z699 444 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 TFAP2DQ7Z6R9 452 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 FAM9CQ8IZT9 166 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 RNF148Q8N7C7 305 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ZFP28Q8NHY6 868 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 FAM81AQ8TBF8 368 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 MIPOL1Q8TD10 442 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 BLOC1S5Q8TDH9 187 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ANKRD49Q8WVL7 239 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 SEPT8Q92599 483 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PSMG2Q969U7 264 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 NMD3Q96D46 503 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PDLIM5Q96HC4 596 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 CDKN2AIPNLQ96HQ2 116 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 MARK4Q96L34 752 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 MYRFLQ96LU7 910 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 TBATAQ96M53 351 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PGLYRP2Q96PD5 576 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PSKH2Q96QS6 385 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 TMEM209Q96SK2 561 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 SH3GL1Q99961 368 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 CINPQ9BW66 212 aaPredicted RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ATXN3LQ9H3M9 355 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms