RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 GRNP28799 593 aaKnown RBP18.13■□□□□ 0.49
KATNB1-202ENST00000562542 SOX5P35711 763 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 CAPZBP47756 277 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 STC1P52823 247 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 CDK18Q07002 472 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 CISD2Q8N5K1 135 aaKnown RBP18.13■□□□□ 0.49
KATNB1-202ENST00000562542 SIDT2Q8NBJ9 832 aaKnown RBP18.13■□□□□ 0.49
KATNB1-202ENST00000562542 NSMCE1Q8WV22 266 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 PIH1D2Q8WWB5 315 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 KLHL6Q8WZ60 621 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 RSC1A1Q92681 617 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 MR1Q95460 341 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 KLC4Q9NSK0 619 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 GPR83Q9NYM4 423 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 PCSK1NQ9UHG2 260 aa18.13■□□□□ 0.49
KATNB1-202ENST00000562542 PDZK1P1A8MUH7 402 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 CEACAM4O75871 244 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 TMEM63AO94886 807 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 PDHA1P08559 390 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 PRF1P14222 555 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 XRCC1P18887 633 aaPredicted RBP18.12■□□□□ 0.49
KATNB1-202ENST00000562542 KCNAB1Q14722 419 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 SEPT7Q16181 437 aaKnown RBP18.12■□□□□ 0.49
KATNB1-202ENST00000562542 RALGPS1Q5JS13 557 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 ERMARDQ5T6L9 678 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 MON1BQ7L1V2 547 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 SNRNP25Q9BV90 132 aaKnown RBP18.12■□□□□ 0.49
KATNB1-202ENST00000562542 SCHIP1Q9P0W5 487 aaPredicted RBP18.12■□□□□ 0.49
KATNB1-202ENST00000562542 SIK3Q9Y2K2 1263 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 PPIL1Q9Y3C6 166 aa18.12■□□□□ 0.49
KATNB1-202ENST00000562542 SSU72P8A0A1W2PR75 194 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 MTA2O94776 668 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 FOLR1P15328 257 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 LPOP22079 712 aaPredicted RBP18.11■□□□□ 0.49
KATNB1-202ENST00000562542 PSMA2P25787 234 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 MMP13P45452 471 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 ARL4DP49703 201 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 ITGA1P56199 1179 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 POLR2FP61218 127 aaKnown RBP18.11■□□□□ 0.49
KATNB1-202ENST00000562542 OGDHQ02218 1023 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 ITKQ08881 620 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 RAPSNQ13702 412 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 PLA2G4EQ3MJ16 856 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 AOPEPQ8N6M6 819 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 FCRL4Q96PJ5 515 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 NLRC4Q9NPP4 1024 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 CNOT6Q9ULM6 557 aaKnown RBP18.11■□□□□ 0.49
KATNB1-202ENST00000562542 SNX7Q9UNH6 387 aa18.11■□□□□ 0.49
KATNB1-202ENST00000562542 A0A0J9YYE9 177 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 TCRBV5S1A1TA0A578 114 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 NUAK1O60285 661 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 CPNE3O75131 537 aaKnown RBP18.1■□□□□ 0.49
KATNB1-202ENST00000562542 TRBC1P01850 177 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 SLC19A1P41440 591 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 ACY1Q03154 408 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 KYNUQ16719 465 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 INSCQ1MX18 579 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 PLEKHN1Q494U1 663 aaPredicted RBP18.1■□□□□ 0.49
KATNB1-202ENST00000562542 TDRD12Q587J7 1177 aaKnown RBP18.1■□□□□ 0.49
KATNB1-202ENST00000562542 MARC1Q5VT66 337 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 CRTC3Q6UUV7 619 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 ZC3H18Q86VM9 953 aaKnown RBP18.1■□□□□ 0.49
KATNB1-202ENST00000562542 ATPAF2Q8N5M1 289 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 UNKQ9C0B0 810 aaKnown RBP18.1■□□□□ 0.49
KATNB1-202ENST00000562542 CARD9Q9H257 536 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 GANQ9H2C0 597 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 ARFGAP3Q9NP61 516 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 WASH6PQ9NQA3 447 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 ZNF624Q9P2J8 865 aaPredicted RBP18.1■□□□□ 0.49
KATNB1-202ENST00000562542 DNPEPQ9ULA0 475 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 ENTPD4Q9Y227 616 aa18.1■□□□□ 0.49
KATNB1-202ENST00000562542 FADS2P1A8MWK0 482 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 F5H423 210 aaPredicted RBP18.09■□□□□ 0.49
KATNB1-202ENST00000562542 CLDN7O95471 211 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 PEX11BO96011 259 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 EBLN1P0CF75 366 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 ZNF8P17098 575 aaPredicted RBP18.09■□□□□ 0.49
KATNB1-202ENST00000562542 LAMB3Q13751 1172 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 GPR18Q14330 331 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 CAMK4Q16566 473 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 PPP1R15BQ5SWA1 713 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 BPHLQ86WA6 291 aaPredicted RBP18.09■□□□□ 0.49
KATNB1-202ENST00000562542 TMEM126BQ8IUX1 230 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 TTC30BQ8N4P2 665 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.09■□□□□ 0.49
KATNB1-202ENST00000562542 MLKLQ8NB16 471 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 UBXN4Q92575 508 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 CXorf40BQ96DE9 158 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 RANBP9Q96S59 729 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 PEBP4Q96S96 227 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 MLPHQ9BV36 600 aaPredicted RBP18.09■□□□□ 0.49
KATNB1-202ENST00000562542 ILKAPQ9H0C8 392 aaPredicted RBP18.09■□□□□ 0.49
KATNB1-202ENST00000562542 OR2AG1Q9H205 316 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 NT5MQ9NPB1 228 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 FGF21Q9NSA1 209 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 FAM207AQ9NSI2 230 aaPredicted RBP18.09■□□□□ 0.49
KATNB1-202ENST00000562542 POT1Q9NUX5 634 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 CWC15Q9P013 229 aaKnown RBP18.09■□□□□ 0.49
KATNB1-202ENST00000562542 ATXN10Q9UBB4 475 aa18.09■□□□□ 0.49
KATNB1-202ENST00000562542 DNAJC16Q9Y2G8 782 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms