RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SPP1P10451 314 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 RALAP11233 206 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 KRT3P12035 628 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CCDC130P13994 396 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ATF2P15336 505 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FOSL2P15408 326 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NDUFB7P17568 137 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NCF2P19878 526 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 ITGAXP20702 1163 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 AGAP20933 346 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ATP6V1C1P21283 382 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NR2F2P24468 414 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CYP2F1P24903 491 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 AZGP1P25311 298 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 HOXD9P28356 352 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 TYK2P29597 1187 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ALDH4A1P30038 563 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 HLA-FP30511 346 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 VIPR1P32241 457 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CYP2C18P33260 490 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 HSD17B3P37058 310 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NUP62P37198 522 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 GATA4P43694 442 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 SLC6A12P48065 614 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ARCN1P48444 511 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 KRT6CP48668 564 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ETV1P50549 477 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 TOB1P50616 345 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 SUOXP51687 545 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CLCN5P51795 746 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 GPR143P51810 404 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NCKAP1LP55160 1127 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 TAS2R40P59535 323 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 SRP54P61011 504 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 SNRPEP62304 92 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 RAE1P78406 368 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 NUCB2P80303 420 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PPP2R2BQ00005 443 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 E2F1Q01094 437 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 KRT76Q01546 638 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 MC2RQ01718 297 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 SPIBQ01892 262 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NHLH2Q02577 135 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 MECOMQ03112 1051 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ITIH3Q06033 890 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CXCL9Q07325 125 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 IL24Q13007 206 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CHIT1Q13231 466 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PLD1Q13393 1074 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 DNASE1L3Q13609 305 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FHL3Q13643 280 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 LPIN1Q14693 890 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 RTP5Q14D33 572 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ELAVL1Q15717 326 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 CEBPEQ15744 281 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CYP2A13Q16696 494 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PFKFB3Q16875 520 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 PNLIPRP3Q17RR3 467 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 VWC2Q2TAL6 325 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 USH1GQ495M9 461 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 FAM98BQ52LJ0 330 aaKnown RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 TIGD5Q53EQ6 642 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PLAC9Q5JTB6 97 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 TCTE1Q5JU00 501 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 LDLRAP1Q5SW96 308 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 TREML2Q5T2D2 321 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 LRIF1Q5T3J3 769 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ZNF618Q5T7W0 954 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PRAMEF8Q5VWM4 474 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PMS2CLQ68D20 193 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ARHGAP17Q68EM7 881 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 LRRC8EQ6NSJ5 796 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 DHRS13Q6UX07 377 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 TRIM72Q6ZMU5 477 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 DPY19L3Q6ZPD9 716 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CLEC17AQ6ZS10 378 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 MTSS1LQ765P7 747 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NEK8Q86SG6 692 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 SYVN1Q86TM6 617 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 MISPQ8IVT2 679 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 SERPINA12Q8IW75 414 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 TP53INP2Q8IXH6 220 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PALM2Q8IXS6 379 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 PM20D2Q8IYS1 436 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 CENPLQ8N0S6 344 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 RYBPQ8N488 228 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 KLHL36Q8N4N3 616 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 C12orf76Q8N812 135 aaPredicted RBP2.03□□□□□ -2.08
RTF1-207ENST00000561076 BANPQ8N9N5 519 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 KIAA0895Q8NCT3 520 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 DBF4BQ8NFT6 615 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 ABHD11Q8NFV4 315 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 OR56A1Q8NGH5 318 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 OR52K1Q8NGK4 314 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 OR13C2Q8NGS9 318 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 SLC5A11Q8WWX8 675 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 SELENOMQ8WWX9 145 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 NSMAFQ92636 917 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 KAT2AQ92830 837 aa2.03□□□□□ -2.08
RTF1-207ENST00000561076 KAT2BQ92831 832 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms