RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CTSEP14091 401 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 MC4RP32245 332 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 FOXN2P32314 431 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 POLD2P49005 469 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 ITGA8P53708 1063 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CRADDP78560 199 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 TMPRSS15P98073 1019 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 IL9RQ01113 521 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 LRP8Q14114 963 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 ITIH4Q14624 930 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 PUM1Q14671 1186 aaKnown RBP eCLIP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 PCM1Q15154 2024 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 KHDC1Q4VXA5 237 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 GLE1Q53GS7 698 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 GPRC6AQ5T6X5 926 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 OGFOD3Q6PK18 319 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CERS6Q6ZMG9 384 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 RD3Q7Z3Z2 195 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CTAGE6Q86UF2 777 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 TRIM74Q86UV6 250 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 GATAD2AQ86YP4 633 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CCNJLQ8IV13 435 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 NAXDQ8IW45 347 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CTAGE4Q8IX94 777 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 COL27A1Q8IZC6 1860 aaPredicted RBP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 AGGF1Q8N302 714 aaeCLIP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 NXPE1Q8N323 547 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 MPP5Q8N3R9 675 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CEP112Q8N8E3 955 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 OR4L1Q8NH43 312 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 HEXDCQ8WVB3 486 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 HDAC10Q969S8 669 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 ZNF514Q96K75 400 aaPredicted RBP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CDC6Q99741 560 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 NAT9Q9BTE0 207 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 LRRC1Q9BTT6 524 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 DUSP23Q9BVJ7 150 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 ZCCHC2Q9C0B9 1178 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 RAB17Q9H0T7 212 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 TMEM168Q9H0V1 697 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 SUDS3Q9H7L9 328 aaPredicted RBP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CAAP1Q9H8G2 361 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 L2HGDHQ9H9P8 463 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 CARS2Q9HA77 564 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 SLC2A6Q9UGQ3 507 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 BTBD3Q9Y2F9 522 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 TMEM98Q9Y2Y6 226 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 SNX24Q9Y343 169 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 UTP11Q9Y3A2 253 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 ST14Q9Y5Y6 855 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 SLC30A1Q9Y6M5 507 aa9.52□□□□□ -0.89
RABGGTA-221ENST00000561055 GOLGA8MH3BSY2 632 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 CCL22O00626 93 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 KMOO15229 486 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 YY2O15391 372 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 GPR39O43194 453 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 GRID2O43424 1007 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 SGTAO43765 313 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 SDC3O75056 442 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 USP1O94782 785 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 ASMTLO95671 621 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 GOT2P00505 430 aaKnown RBP9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 ZNF8P17098 575 aaPredicted RBP9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 ACRV1P26436 265 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 ARNTP27540 789 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 NMBRP28336 390 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 ARCN1P48444 511 aaKnown RBP9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 PRAMEP78395 509 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 CTBSQ01459 385 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 CAV1Q03135 178 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 FNBP1LQ5T0N5 605 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 LYPLAL1Q5VWZ2 237 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 KIAA0930Q6ICG6 404 aaPredicted RBP9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 PSAPL1Q6NUJ1 521 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 ZCCHC8Q6NZY4 707 aaKnown RBP9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 AFTPHQ6ULP2 937 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 C11orf96Q7Z7L8 435 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 GKN2Q86XP6 184 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 NRROSQ86YC3 692 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 GALNT13Q8IUC8 556 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 ZNF547Q8IVP9 402 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 PIANPQ8IYJ0 282 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 PDIK1LQ8N165 341 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 RASGEF1AQ8N9B8 481 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 GPR150Q8NGU9 434 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 LMX1AQ8TE12 382 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 SCG3Q8WXD2 468 aaKnown RBP9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 MFSD3Q96ES6 412 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 LINC00615Q96LM1 132 aaPredicted RBP9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 OR2M4Q96R27 311 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 EBNA1BP2Q99848 306 aaKnown RBP9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 BOCQ9BWV1 1114 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 GSDMCQ9BYG8 508 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 PHACTR1Q9C0D0 580 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 OR2AG1Q9H205 316 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 SLC32A1Q9H598 525 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 ZDHHC3Q9NYG2 299 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 GRHL1Q9NZI5 618 aa9.51□□□□□ -0.89
RABGGTA-221ENST00000561055 CRLS1Q9UJA2 301 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms