RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 HS6ST1O60243 411 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 CHRNA1P02708 482 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 ITIH1P19827 911 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 BMPR1AP36894 532 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 SERPINB10P48595 397 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 CXCR3P49682 368 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 EEFSECP57772 596 aaKnown RBP16.37■□□□□ 0.21
TPM1-228ENST00000560975 CHRNB3Q05901 458 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 NDUFA5Q16718 116 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 LRIT3Q3SXY7 679 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 C9orf57Q5W0N0 161 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 KIAA0930Q6ICG6 404 aaPredicted RBP16.37■□□□□ 0.21
TPM1-228ENST00000560975 SPESP1Q6UW49 350 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 FBXO16Q8IX29 292 aaPredicted RBP16.37■□□□□ 0.21
TPM1-228ENST00000560975 OR13J1Q8NGT2 312 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 FAR1Q8WVX9 515 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 TSPAN17Q96FV3 270 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 SMOC2Q9H3U7 446 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 CARS2Q9HA77 564 aaKnown RBP16.37■□□□□ 0.21
TPM1-228ENST00000560975 ITM2CQ9NQX7 267 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 KLK14Q9P0G3 267 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 FBXW11Q9UKB1 542 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 INVSQ9Y283 1065 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 PSMD3O43242 534 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 TGFB3P10600 412 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 DNAJB2P25686 324 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 PSMB9P28065 219 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 CLCN5P51795 746 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 SULT1C3Q6IMI6 304 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 BNIPLQ7Z465 357 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 MMAAQ8IVH4 418 aaKnown RBP16.37■□□□□ 0.21
TPM1-228ENST00000560975 POC5Q8NA72 575 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 BEST2Q8NFU1 509 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 FRS2Q8WU20 508 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 RORBQ92753 470 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 RNF34Q969K3 372 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 AURKBQ96GD4 344 aaPredicted RBP16.37■□□□□ 0.21
TPM1-228ENST00000560975 DUSP16Q9BY84 665 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 ERVK-18Q9QC07 812 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 THSD7AQ9UPZ6 1657 aa16.37■□□□□ 0.21
TPM1-228ENST00000560975 TBX1O43435 398 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 ASNA1O43681 348 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 ANXA9O76027 345 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 GABARAPO95166 117 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 CYBBP04839 570 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 EIF2S1P05198 315 aaKnown RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 AKAP5P24588 427 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 CA8P35219 290 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 COPZ1P61923 177 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 CXCL9Q07325 125 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 FAM98BQ52LJ0 330 aaKnown RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 ENPP6Q6UWR7 440 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 SAPCD2Q86UD0 394 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 PROSER1Q86XN7 944 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 PIK3C3Q8NEB9 887 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 CHST13Q8NET6 341 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 FIG4Q92562 907 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 RPL3LQ92901 407 aaKnown RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 ZNF486Q96H40 463 aaPredicted RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 SLC2A13Q96QE2 648 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 MRM3Q9HC36 420 aaKnown RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 SLC22A1O15245 554 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 NUAK1O60285 661 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 SPNP16150 400 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 HTR1EP28566 365 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 IL5RAQ01344 420 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 TSPY1Q01534 308 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 RCAN2Q14206 197 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 CRY1Q16526 586 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 FBXO47Q5MNV8 452 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 GJC2Q5T442 439 aaPredicted RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 KANK2Q63ZY3 851 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 TXNDC11Q6PKC3 985 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 MCOLN3Q8TDD5 553 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 CEP44Q9C0F1 390 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 WDCPQ9H6R7 721 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 MAGEE1Q9HCI5 957 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 FBXO8Q9NRD0 319 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 THG1LQ9NWX6 298 aaKnown RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 LEF1Q9UJU2 399 aaPredicted RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 DYTNA2CJ06 578 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 SLC22A3O75751 556 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 PARNO95453 639 aaKnown RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 CST1P01037 141 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 USP17L7P0C7H9 530 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 RAP2AP10114 183 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 NPR3P17342 541 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 FMO3P31513 532 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 ALDH7A1P49419 539 aaKnown RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 POLR2JP52435 117 aaKnown RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 CCNA1P78396 465 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 TNFAIP1Q13829 316 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 RAB44Q7Z6P3 723 aaPredicted RBP16.36■□□□□ 0.21
TPM1-228ENST00000560975 OSTM1Q86WC4 334 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 TMEM199Q8N511 208 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 ATPAF2Q8N5M1 289 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 B3GALNT2Q8NCR0 500 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 AGBL3Q8NEM8 1001 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 APPL2Q8NEU8 664 aa16.36■□□□□ 0.21
TPM1-228ENST00000560975 TRIT1Q9H3H1 467 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms