RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 SCNN1AP37088 669 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 PBX1P40424 430 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 CSNK1DP48730 415 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 UBE2IP63279 158 aaKnown RBP9.38□□□□□ -0.91
HERC1-210ENST00000560897 TUBB4BP68371 445 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 ATP11AP98196 1134 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 DPTQ07507 201 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 TUBB2AQ13885 445 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 HIF1AQ16665 826 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 CDO1Q16878 200 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 DCAF10Q5QP82 559 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 ARTNQ5T4W7 220 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 FAM69BQ5VUD6 431 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 GFRALQ6UXV0 394 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 Q6ZVL8 140 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 HSD11B1LQ7Z5J1 315 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 MRGPREQ86SM8 312 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 SMYD4Q8IYR2 804 aaPredicted RBP9.38□□□□□ -0.91
HERC1-210ENST00000560897 MSANTD4Q8NCY6 345 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 OR8K5Q8NH50 307 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 SPATA3Q8NHX4 192 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 LMO3Q8TAP4 145 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 SPATA32Q96LK8 384 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 FAM81BQ96LP2 452 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 LRFN5Q96NI6 719 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 SPOCK3Q9BQ16 436 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 TUBB2BQ9BVA1 445 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 KLC2Q9H0B6 622 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 GSX1Q9H4S2 264 aaPredicted RBP9.38□□□□□ -0.91
HERC1-210ENST00000560897 CATSPERBQ9H7T0 1116 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 CD84Q9UIB8 345 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 PRKAB1Q9Y478 270 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 SLC30A1Q9Y6M5 507 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 CSPG4Q6UVK1 2322 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 GOLGA8SH3BPF8 625 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 MTA2O94776 668 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 CPP00450 1065 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 XRCC1P18887 633 aaPredicted RBP9.37□□□□□ -0.91
HERC1-210ENST00000560897 ADRA1BP35368 520 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 SCNN1BP51168 640 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 AP1S1P61966 158 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 RBPJQ06330 500 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 LTBQ06643 244 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 NCF4Q15080 339 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 TLR1Q15399 786 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.37□□□□□ -0.91
HERC1-210ENST00000560897 FOXD4L6Q3SYB3 417 aaPredicted RBP9.37□□□□□ -0.91
HERC1-210ENST00000560897 TMTC4Q5T4D3 741 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 FOXD4L5Q5VV16 416 aaPredicted RBP9.37□□□□□ -0.91
HERC1-210ENST00000560897 KLHL35Q6PF15 583 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 TMEM207Q6UWW9 146 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 FOXD4L3Q6VB84 417 aaPredicted RBP9.37□□□□□ -0.91
HERC1-210ENST00000560897 KMT5CQ86Y97 462 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 DSELQ8IZU8 1212 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 LRRN4CLQ8ND94 238 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 EXD1Q8NHP7 514 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 CPLX3Q8WVH0 158 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 FOXD4L4Q8WXT5 416 aaPredicted RBP9.37□□□□□ -0.91
HERC1-210ENST00000560897 C18orf8Q96DM3 657 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 SLC41A2Q96JW4 573 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 PCMTD1Q96MG8 357 aaPredicted RBP9.37□□□□□ -0.91
HERC1-210ENST00000560897 PLEKHG4BQ96PX9 1271 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 EPS8L2Q9H6S3 715 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 RMI1Q9H9A7 625 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 KCND1Q9NSA2 647 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 POT1Q9NUX5 634 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 VPS18Q9P253 973 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 EPHA6Q9UF33 1036 aa9.37□□□□□ -0.91
HERC1-210ENST00000560897 PRRC2AP48634 2157 aaKnown RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 IGHV5-51A0A0C4DH38 117 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 A0A1B0GVL5 298 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 UBA6A0AVT1 1052 aaPredicted RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 PDZK1P1A8MUH7 402 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 FAM72CH0Y354 149 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 C19orf84I3L1E1 186 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 TRAFD1O14545 582 aaPredicted RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 LDB2O43679 373 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 DNAJC6O75061 913 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 CLDN14O95500 239 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 PFKFB1P16118 471 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 AGAP20933 346 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 HADHAP40939 763 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 RGRP47804 291 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 HSD11B2P80365 405 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 LRRC63Q05C16 580 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 Q0VFX4 171 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 PRKD1Q15139 912 aaPredicted RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 CYP2A13Q16696 494 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 DNTTIP2Q5QJE6 756 aaKnown RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 PLEKHS1Q5SXH7 462 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 FAM72AQ5TYM5 149 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 FAAH2Q6GMR7 532 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 FAM72DQ6L9T8 149 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 DUS1LQ6P1R4 473 aaKnown RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 USP45Q70EL2 814 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 FAM72BQ86X60 149 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 RBM12BQ8IXT5 1001 aaKnown RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 SYTL1Q8IYJ3 562 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 TSEN2Q8NCE0 465 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms