RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 A0A0J9YYE9 177 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 TRBC1P01850 177 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 CDH6P55285 790 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 RPS18P62269 152 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 DPYSQ14117 519 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 PRR30Q53SZ7 412 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 PAPD7Q5XG87 772 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 ACAD10Q6JQN1 1059 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 IRGCQ6NXR0 463 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 FAM92BQ6ZTR7 304 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 RHOT1Q8IXI2 618 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 RAVER1Q8IY67 606 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 MCOLN2Q8IZK6 566 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 AOPEPQ8N6M6 819 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 SIDT2Q8NBJ9 832 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 PEBP4Q96S96 227 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 MLXIPLQ9NP71 852 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 NT5MQ9NPB1 228 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 ERRFI1Q9UJM3 462 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 SLC5A6Q9Y289 635 aa17.56■□□□□ 0.4
TSPAN3-208ENST00000560514 CELSR2Q9HCU4 2923 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 DOPEY1Q5JWR5 2465 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 PDZK1P1A8MUH7 402 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 NUAK1O60285 661 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 MAFKO60675 156 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 PEX11BO96011 259 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 LDLRP01130 860 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 CA4P22748 312 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 MIPP30301 263 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 CLCNKAP51800 687 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 TUBB3Q13509 450 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 ELOAQ14241 798 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 INSCQ1MX18 579 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 RBM43Q6ZSC3 357 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 KLHL6Q8WZ60 621 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 MOCOSQ96EN8 888 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 FCRL4Q96PJ5 515 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 SMIM14Q96QK8 99 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 POLR1EQ9GZS1 481 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 FAM83DQ9H4H8 585 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 HAUS2Q9NVX0 235 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 PKD2L2Q9NZM6 624 aa17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 CNOT6Q9ULM6 557 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-208ENST00000560514 PRRC2CQ9Y520 2896 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 WIPF3A6NGB9 483 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 LRRC10BA6NIK2 292 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 EPHB6O15197 1021 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 KIF1CO43896 1103 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 CLDN7O95471 211 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 NELFEP18615 380 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 SERPINB6P35237 376 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 CAPZBP47756 277 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 ARL4DP49703 201 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 MAMLD1Q13495 774 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 NAA30Q147X3 362 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 SEPT7Q16181 437 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 TDRD12Q587J7 1177 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 CDKAL1Q5VV42 579 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 PWWP2BQ6NUJ5 590 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 PPP1R2P3Q6NXS1 205 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 FAM199XQ6PEV8 388 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 BPHLQ86WA6 291 aaPredicted RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 NEK11Q8NG66 645 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 CCHCR1Q8TD31 782 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 PNPLA2Q96AD5 504 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 RUFY1Q96T51 708 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 POT1Q9NUX5 634 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 FARSAQ9Y285 508 aaKnown RBP17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 TTLL3Q9Y4R7 772 aa17.54■□□□□ 0.4
TSPAN3-208ENST00000560514 ABCA12Q86UK0 2595 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 C1orf232A0A0U1RR37 186 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 FADS2P1A8MWK0 482 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 FZD6O60353 706 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 TIAF1O95411 115 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 CCDC172P0C7W6 258 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 AMPD1P23109 780 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 SLC19A1P41440 591 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 RIPPLY3P57055 190 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 ACY1Q03154 408 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 NR6A1Q15406 480 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 RBM12BQ8IXT5 1001 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 TTC13Q8NBP0 860 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 UBXN4Q92575 508 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 RSC1A1Q92681 617 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 MR1Q95460 341 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 TCTN2Q96GX1 697 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 OR2AG1Q9H205 316 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 SCHIP1Q9P0W5 487 aaPredicted RBP17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 ATXN10Q9UBB4 475 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 CHKBQ9Y259 395 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 DNAJC16Q9Y2G8 782 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 SIK3Q9Y2K2 1263 aa17.53■□□□□ 0.4
TSPAN3-208ENST00000560514 SLC25A14O95258 325 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-208ENST00000560514 ZNF8P17098 575 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-208ENST00000560514 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.4
TSPAN3-208ENST00000560514 PTGIRP43119 386 aa17.52■□□□□ 0.4
TSPAN3-208ENST00000560514 SPINT3P49223 89 aa17.52■□□□□ 0.4
TSPAN3-208ENST00000560514 IL10RAQ13651 578 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms