RNA–Protein interactions for RNA: ENST00000559863.1

IRF9-206, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-206ENST00000559863 TRAV34A0A0B4J273 112 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.28□□□□□ -0.6
IRF9-206ENST00000559863 ARHGEF37A1IGU5 675 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 M0R296 226 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 SERPINC1P01008 464 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 HEXAP06865 529 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 HOXC8P31273 242 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 F2RL1P55085 397 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 WDR5P61964 334 aaKnown RBP11.28□□□□□ -0.6
IRF9-206ENST00000559863 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 GPAT4Q86UL3 456 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 FAM185AQ8N0U4 392 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 LINC01356Q8N9X3 169 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 ARHGEF26Q96DR7 871 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 RAD9AQ99638 391 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 PI4K2AQ9BTU6 479 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 MBNL1Q9NR56 388 aaKnown RBP11.28□□□□□ -0.6
IRF9-206ENST00000559863 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.28□□□□□ -0.6
IRF9-206ENST00000559863 EHD3Q9NZN3 535 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 PADI1Q9ULC6 663 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 KLHL20Q9Y2M5 609 aa11.28□□□□□ -0.6
IRF9-206ENST00000559863 DDX49Q9Y6V7 483 aaKnown RBP11.28□□□□□ -0.6
IRF9-206ENST00000559863 LINC01553A4QN01 128 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 ASB14A6NK59 587 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 H0YAE9 185 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 HIP1O00291 1037 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 ETV2O00321 342 aaPredicted RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 RNASET2O00584 256 aaKnown RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 PRAMEF2O60811 474 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 MITFO75030 526 aaPredicted RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 TPPPO94811 219 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 GJB5O95377 273 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 ADAP00813 363 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 FAM200BP0CF97 657 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 TOP1P11387 765 aaKnown RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 PON1P27169 355 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 BMPR1AP36894 532 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 DIO1P49895 249 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 CSE1LP55060 971 aaKnown RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 SHC2P98077 582 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 YWHAHQ04917 246 aaPredicted RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 PPP2R5BQ15173 497 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 RNPS1Q15287 305 aaKnown RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 PCGF3Q3KNV8 242 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 RNF144BQ7Z419 303 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 ARL6IP6Q8N6S5 226 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 SCAIQ8N9R8 606 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 ATOH1Q92858 354 aaPredicted RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 EXOC4Q96A65 974 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 SLC25A23Q9BV35 468 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 ADGRE3Q9BY15 652 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 CPVLQ9H3G5 476 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 PLK3Q9H4B4 646 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 SLC6A13Q9NSD5 602 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 TMCC3Q9ULS5 477 aa11.27□□□□□ -0.61
IRF9-206ENST00000559863 AAR2Q9Y312 384 aaKnown RBP11.27□□□□□ -0.61
IRF9-206ENST00000559863 TET1Q8NFU7 2136 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 C17orf100A8MU93 164 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 RTCAO00442 366 aaKnown RBP11.26□□□□□ -0.61
IRF9-206ENST00000559863 TJP3O95049 919 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 CD72P21854 359 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 NOVP48745 357 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 CNTN2Q02246 1040 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 BMPR2Q13873 1038 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 SFTPA1Q8IWL2 248 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 CHURC1Q8WUH1 139 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 PTP4A1Q93096 173 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 PGBD1Q96JS3 809 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 SRSF8Q9BRL6 282 aaKnown RBP11.26□□□□□ -0.61
IRF9-206ENST00000559863 RNF41Q9H4P4 317 aaPredicted RBP11.26□□□□□ -0.61
IRF9-206ENST00000559863 PDZD7Q9H5P4 517 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 TMEM248Q9NWD8 314 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 WSB2Q9NYS7 404 aaPredicted RBP11.26□□□□□ -0.61
IRF9-206ENST00000559863 ABI3Q9P2A4 366 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 FZD4Q9ULV1 537 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 REXO2Q9Y3B8 237 aaKnown RBP11.26□□□□□ -0.61
IRF9-206ENST00000559863 PTPRSQ13332 1948 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 TECTAO75443 2155 aa11.26□□□□□ -0.61
IRF9-206ENST00000559863 CACNA1HO95180 2353 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 PRR23AA6NEV1 266 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 PRPF4O43172 522 aaKnown RBP eCLIP11.25□□□□□ -0.61
IRF9-206ENST00000559863 PAPSS1O43252 624 aaPredicted RBP11.25□□□□□ -0.61
IRF9-206ENST00000559863 SUV39H1O43463 412 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 CNTN5O94779 1100 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 SCAF4O95104 1147 aaKnown RBP11.25□□□□□ -0.61
IRF9-206ENST00000559863 CBX6O95503 412 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 FTCDO95954 541 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 MBPP02686 304 aaPredicted RBP11.25□□□□□ -0.61
IRF9-206ENST00000559863 GOLGA8HP0CJ92 632 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 PDHBP11177 359 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 SLC2A4P14672 509 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 TGM2P21980 687 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 CHMLP26374 656 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 NDUFS1P28331 727 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 TYK2P29597 1187 aa11.25□□□□□ -0.61
IRF9-206ENST00000559863 STAT6P42226 847 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms