RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 MLXIPLQ9NP71 852 aa10.63□□□□□ -0.71
TRAF3-207ENST00000559734 NLRC4Q9NPP4 1024 aa10.63□□□□□ -0.71
TRAF3-207ENST00000559734 KLC4Q9NSK0 619 aa10.63□□□□□ -0.71
TRAF3-207ENST00000559734 ASF1BQ9NVP2 202 aa10.63□□□□□ -0.71
TRAF3-207ENST00000559734 SCHIP1Q9P0W5 487 aaPredicted RBP10.63□□□□□ -0.71
TRAF3-207ENST00000559734 VPS18Q9P253 973 aa10.63□□□□□ -0.71
TRAF3-207ENST00000559734 DNAJC16Q9Y2G8 782 aa10.63□□□□□ -0.71
TRAF3-207ENST00000559734 GOLGA6L3A6NEY3 463 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 TOX3O15405 576 aaPredicted RBP10.62□□□□□ -0.71
TRAF3-207ENST00000559734 HNRNPRO43390 633 aaKnown RBP10.62□□□□□ -0.71
TRAF3-207ENST00000559734 MTA2O94776 668 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 TMEM63AO94886 807 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 CBX6O95503 412 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 PDHA1P08559 390 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 PRF1P14222 555 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 PSMA2P25787 234 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 SOX5P35711 763 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 MMP13P45452 471 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 CAPZBP47756 277 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 ARL4DP49703 201 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 KLK7P49862 253 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 STC1P52823 247 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 CAMK4Q16566 473 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 INSCQ1MX18 579 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 TDRD12Q587J7 1177 aaKnown RBP10.62□□□□□ -0.71
TRAF3-207ENST00000559734 ZNF648Q5T619 568 aaPredicted RBP10.62□□□□□ -0.71
TRAF3-207ENST00000559734 ERMARDQ5T6L9 678 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 MON1BQ7L1V2 547 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 PRSS42Q7Z5A4 293 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 IQCKQ8N0W5 287 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 ATPAF2Q8N5M1 289 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 PIH1D2Q8WWB5 315 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 ZDHHC12Q96GR4 267 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 PEBP4Q96S96 227 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 MLPHQ9BV36 600 aaPredicted RBP10.62□□□□□ -0.71
TRAF3-207ENST00000559734 GANQ9H2C0 597 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 RMI1Q9H9A7 625 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 FAM207AQ9NSI2 230 aaPredicted RBP10.62□□□□□ -0.71
TRAF3-207ENST00000559734 GPR83Q9NYM4 423 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 SNX7Q9UNH6 387 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 FARSAQ9Y285 508 aaKnown RBP10.62□□□□□ -0.71
TRAF3-207ENST00000559734 SIK3Q9Y2K2 1263 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 PCDHGB7Q9Y5F8 929 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 RP1L1Q8IWN7 2480 aaPredicted RBP10.62□□□□□ -0.71
TRAF3-207ENST00000559734 ITPR2Q14571 2701 aa10.62□□□□□ -0.71
TRAF3-207ENST00000559734 A0A0J9YYE9 177 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 FADS2P1A8MWK0 482 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 CLDN7O95471 211 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 TRBC1P01850 177 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 EBLN1P0CF75 366 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 FOLR1P15328 257 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 ZNF30P17039 623 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 ZNF8P17098 575 aaPredicted RBP10.61□□□□□ -0.71
TRAF3-207ENST00000559734 NELFEP18615 380 aaKnown RBP10.61□□□□□ -0.71
TRAF3-207ENST00000559734 SLC19A1P41440 591 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 PPP1CAP62136 330 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 UBE2HP62256 183 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 FAM69BQ5VUD6 431 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 ZC3H18Q86VM9 953 aaKnown RBP10.61□□□□□ -0.71
TRAF3-207ENST00000559734 TMEM126BQ8IUX1 230 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 SLC34A3Q8N130 599 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 KLHL6Q8WZ60 621 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 UNKQ9C0B0 810 aaKnown RBP10.61□□□□□ -0.71
TRAF3-207ENST00000559734 UCK1Q9HA47 277 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 NT5MQ9NPB1 228 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
TRAF3-207ENST00000559734 TAB2Q9NYJ8 693 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 ZNF624Q9P2J8 865 aaPredicted RBP10.61□□□□□ -0.71
TRAF3-207ENST00000559734 TRIM10Q9UDY6 481 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 CNOT6Q9ULM6 557 aaKnown RBP10.61□□□□□ -0.71
TRAF3-207ENST00000559734 TTLL3Q9Y4R7 772 aa10.61□□□□□ -0.71
TRAF3-207ENST00000559734 ABCA12Q86UK0 2595 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 TCRBV5S1A1TA0A578 114 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 EIF3CLB5ME19 914 aaKnown RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 PRPSAP2O60256 369 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 NUAK1O60285 661 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 CPNE3O75131 537 aaKnown RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 CEACAM4O75871 244 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 PEX11BO96011 259 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 XRCC1P18887 633 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 HNRNPH3P31942 346 aaKnown RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 ITGA1P56199 1179 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 ACY1Q03154 408 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 GPR18Q14330 331 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 PLEKHN1Q494U1 663 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 MARC1Q5VT66 337 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 ALS2CLQ60I27 953 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 CERS6Q6ZMG9 384 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 NLRP8Q86W28 1048 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 HPS6Q86YV9 775 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 AOPEPQ8N6M6 819 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 ENDOVQ8N8Q3 282 aaKnown RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 LPCAT1Q8NF37 534 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 CXorf40BQ96DE9 158 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 ZNF514Q96K75 400 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 RANBP9Q96S59 729 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 EIF3CQ99613 913 aaKnown RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 ILKAPQ9H0C8 392 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-207ENST00000559734 OR2AG1Q9H205 316 aa10.6□□□□□ -0.71
TRAF3-207ENST00000559734 CARD9Q9H257 536 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms