RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ZMYND15Q9H091 742 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 TRIM39Q9HCM9 518 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
LRRC28-214ENST00000559433 PKP3Q9Y446 797 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 TRBV23OR9-2A0A075B6M9 112 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 PMS2P1A4D2B8 440 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 GPR89AB7ZAQ6 455 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 BUD23O43709 281 aaKnown RBP12.44□□□□□ -0.42
LRRC28-214ENST00000559433 SNX2O60749 519 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 MTX2O75431 263 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 JMJD7P0C870 316 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 GPR89BP0CG08 455 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 ITPKBP27987 946 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 CCKBRP32239 447 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 EIF3IQ13347 325 aaKnown RBP12.44□□□□□ -0.42
LRRC28-214ENST00000559433 KLF1Q13351 362 aaPredicted RBP12.44□□□□□ -0.42
LRRC28-214ENST00000559433 OLIG2Q13516 323 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 NR1D2Q14995 579 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 PLA2G4EQ3MJ16 856 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 ATP13A5Q4VNC0 1218 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 PHF19Q5T6S3 580 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 SEL1L2Q5TEA6 688 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 FAM151BQ6UXP7 276 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 ARHGEF18Q6ZSZ5 1173 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 RAB11FIP2Q7L804 512 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 JAMLQ86YT9 394 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 FAM71DQ8N9W8 422 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 GDAP1Q8TB36 358 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 SLC37A2Q8TED4 501 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 LRRC45Q96CN5 670 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 AHCYL2Q96HN2 611 aaKnown RBP12.44□□□□□ -0.42
LRRC28-214ENST00000559433 PPP1R2P1Q96PQ5 205 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 VPS35Q96QK1 796 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 OSGEPL1Q9H4B0 414 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 STN1Q9H668 368 aaKnown RBP12.44□□□□□ -0.42
LRRC28-214ENST00000559433 IL26Q9NPH9 171 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 ASCL3Q9NQ33 180 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 IL17CQ9P0M4 197 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 TBC1D29Q9UFV1 150 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 R3HDM2Q9Y2K5 976 aaKnown RBP12.44□□□□□ -0.42
LRRC28-214ENST00000559433 PCDHGA8Q9Y5G5 932 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 BPTFQ12830 3046 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 ZFYVE26Q68DK2 2539 aa12.44□□□□□ -0.42
LRRC28-214ENST00000559433 GLYATL1P3A0A0U1RQE8 302 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 TCRBV7S2A1N4TA0A589 114 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 C5orf60A6NFR6 353 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 PLD2O14939 933 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 CHUKO15111 745 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 PPM1DO15297 605 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 STX7O15400 261 aaKnown RBP12.43□□□□□ -0.42
LRRC28-214ENST00000559433 KLK10O43240 276 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 B4GAT1O43505 415 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 VEGFDO43915 354 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 CPNE6O95741 557 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 EML2O95834 649 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 CCDC175P0C221 793 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 SLC2A4P14672 509 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 ADRA1AP35348 466 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 MLLT3P42568 568 aaPredicted RBP12.43□□□□□ -0.42
LRRC28-214ENST00000559433 GPR3P46089 330 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 UCNP55089 124 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 GTF2H3Q13889 308 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 CHRNA6Q15825 494 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 INSCQ1MX18 579 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 KHDC1Q4VXA5 237 aaKnown RBP12.43□□□□□ -0.42
LRRC28-214ENST00000559433 IGF2-ASQ6U949 168 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 RANBP10Q6VN20 620 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 USP53Q70EK8 1073 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 LRRTM4Q86VH4 590 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 SFRP1Q8N474 314 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 KCNE4Q8WWG9 221 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 TMEM159Q96B96 161 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 PRR11Q96HE9 360 aaPredicted RBP12.43□□□□□ -0.42
LRRC28-214ENST00000559433 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 CMKLR1Q99788 373 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 TBL1YQ9BQ87 522 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 DPH1Q9BZG8 443 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 RDH14Q9HBH5 336 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 LZTFL1Q9NQ48 299 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 KLC4Q9NSK0 619 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 KCNK4Q9NYG8 393 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.43□□□□□ -0.42
LRRC28-214ENST00000559433 TMPRSS11EQ9UL52 423 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 ARL5AQ9Y689 179 aa12.43□□□□□ -0.42
LRRC28-214ENST00000559433 C2orf81A6NN90 581 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 AGRPO00253 132 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 KMOO15229 486 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 GPR39O43194 453 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 PPFIA2O75334 1257 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 CDK14O94921 469 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 ZNF7P17097 686 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-214ENST00000559433 FASLGP48023 281 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 ZFP36L1Q07352 338 aaKnown RBP12.42□□□□□ -0.42
LRRC28-214ENST00000559433 NFATC2Q13469 925 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 ITGA9Q13797 1035 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 SPARCL1Q14515 664 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 PTPRCAPQ14761 206 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 TAF1AQ15573 450 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-214ENST00000559433 TMPRSS9Q7Z410 1059 aa12.42□□□□□ -0.42
LRRC28-214ENST00000559433 ZNF761Q86XN6 746 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms