RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 HOMER3Q9NSC5 361 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 VPS18Q9P253 973 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ZFYVE26Q68DK2 2539 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 PTPRBP23467 1997 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 KNTC1P50748 2209 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 OR51F1A6NGY5 319 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 SNX2O60749 519 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 SRP72O76094 671 aaKnown RBP13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 CDK14O94921 469 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 PRAMEF1O95521 474 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 ECEL1O95672 775 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 MSNP26038 577 aaKnown RBP13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 DUSP3P51452 185 aaPredicted RBP13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 ARSDP51689 593 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 CDH17Q12864 832 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 GPRC6AQ5T6X5 926 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 HES3Q5TGS1 186 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 PAPD7Q5XG87 772 aaKnown RBP13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 PDPK2PQ6A1A2 396 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 CCDC137Q6PK04 289 aaKnown RBP13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 LINC00523Q86TU6 105 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 PHYKPLQ8IUZ5 450 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 ZNF547Q8IVP9 402 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 SDR16C5Q8N3Y7 309 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 ARL10Q8N8L6 244 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 RASGEF1AQ8N9B8 481 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 Q8N9G6 341 aaPredicted RBP13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 MAPK15Q8TD08 544 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 GLMNQ92990 594 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 LRRC45Q96CN5 670 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 ZNF778Q96MU6 729 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 VPS35Q96QK1 796 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 NAPGQ99747 312 aaPredicted RBP13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 CASS4Q9NQ75 786 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 SLC2A6Q9UGQ3 507 aa13.66□□□□□ -0.22
TSPAN3-205ENST00000558745 C1QTNF9BB2RNN3 333 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CHUKO15111 745 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 OPA1O60313 960 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 C1QTNF9P0C862 333 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 JUPP14923 745 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 MC4RP32245 332 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 RPIAP49247 311 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CTSCP53634 463 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 SESN2P58004 480 aaPredicted RBP13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CRADDP78560 199 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 GPS1Q13098 491 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 TARDBPQ13148 414 aaKnown RBP eCLIP13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CYP1B1Q16678 543 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CCNI2Q6ZMN8 369 aaPredicted RBP13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 DET1Q7L5Y6 550 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CREG2Q8IUH2 290 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 NAGSQ8N159 534 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 ARL14Q8N4G2 192 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 BEND7Q8N7W2 519 aaPredicted RBP13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CCDC74AQ96AQ1 378 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CDKN2AIPNLQ96HQ2 116 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 CCDC3Q9BQI4 270 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 DDX47Q9H0S4 455 aaKnown RBP13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 ABCG4Q9H172 646 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 SYNDIG1Q9H7V2 258 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 PRDM8Q9NQV8 689 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 KLC4Q9NSK0 619 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 TBC1D29Q9UFV1 150 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 FEZ2Q9UHY8 353 aaPredicted RBP13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 ZMIZ1Q9ULJ6 1067 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 DNAJC16Q9Y2G8 782 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 MSRB2Q9Y3D2 182 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 RNF215Q9Y6U7 377 aa13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 SETXQ7Z333 2677 aaKnown RBP13.65□□□□□ -0.22
TSPAN3-205ENST00000558745 FAM221BA6H8Z2 402 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 OR2AG2A6NM03 316 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ERI2A8K979 691 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 PPM1DO15297 605 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 PHF2O75151 1096 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 PPFIA2O75334 1257 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 MT-CO3P00414 261 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 TCP1P17987 556 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 E2F1Q01094 437 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ILKQ13418 452 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 HLTFQ14527 1009 aaKnown RBP eCLIP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 C14orf28Q4W4Y0 310 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ZRANB3Q5FWF4 1079 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ANKRD22Q5VYY1 191 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ZDHHC20Q5W0Z9 365 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 TMEM220Q6QAJ8 160 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 C11orf96Q7Z7L8 435 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 LRRTM4Q86VH4 590 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 ZNF761Q86XN6 746 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 DTX3LQ8TDB6 740 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 SGF29Q96ES7 293 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 TMEM121BQ9BXQ6 578 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 RMI1Q9H9A7 625 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 NLE1Q9NVX2 485 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 SCHIP1Q9P0W5 487 aaPredicted RBP13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 LRIT1Q9P2V4 623 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 NEU2Q9Y3R4 380 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 NEUROG3Q9Y4Z2 214 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 FRYQ5TBA9 3013 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 CEP295Q9C0D2 2601 aa13.64□□□□□ -0.23
TSPAN3-205ENST00000558745 A0A1W2PQM1 296 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms