RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 RANBP9Q96S59 729 aa13.45□□□□□ -0.26
TMED3-205ENST00000558562 C2orf49Q9BVC5 232 aaPredicted RBP13.45□□□□□ -0.26
TMED3-205ENST00000558562 ERVMER34-1Q9H9K5 563 aa13.45□□□□□ -0.26
TMED3-205ENST00000558562 CHRAC1Q9NRG0 131 aa13.45□□□□□ -0.26
TMED3-205ENST00000558562 C20orf96Q9NUD7 363 aaPredicted RBP13.45□□□□□ -0.26
TMED3-205ENST00000558562 NKIRAS1Q9NYS0 192 aa13.45□□□□□ -0.26
TMED3-205ENST00000558562 ZFATQ9P243 1243 aa13.45□□□□□ -0.26
TMED3-205ENST00000558562 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
TMED3-205ENST00000558562 LHX3Q9UBR4 397 aa13.45□□□□□ -0.26
TMED3-205ENST00000558562 INTS6Q9UL03 887 aaKnown RBP13.45□□□□□ -0.26
TMED3-205ENST00000558562 FZD4Q9ULV1 537 aa13.45□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3DA0A087WVF3 549 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3IA0A087WXS9 549 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3EA0A087X179 549 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3KA0A087X1G2 549 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 LOC285095A0A1B0GVY8 99 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CCDC78A2IDD5 438 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 HEATR9A2RTY3 570 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3FA6NER0 549 aaPredicted RBP13.44□□□□□ -0.26
TMED3-205ENST00000558562 C10orf142B7Z368 130 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3LB9A6J9 549 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 INSIG1O15503 277 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 PRPF4O43172 522 aaKnown RBP eCLIP13.44□□□□□ -0.26
TMED3-205ENST00000558562 KLK10O43240 276 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 SPAG7O75391 227 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CD160O95971 181 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3HP0C7X1 549 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 C6P13671 934 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 PAMP19021 973 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CR2P20023 1033 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CNTFP26441 200 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 SCNN1BP51168 640 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 RHOAP61586 193 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 GABREP78334 506 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CDK18Q07002 472 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 SFSWAPQ12872 951 aaKnown RBP13.44□□□□□ -0.26
TMED3-205ENST00000558562 SLC12A1Q13621 1099 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 INO80DQ53TQ3 878 aaPredicted RBP13.44□□□□□ -0.26
TMED3-205ENST00000558562 SIRPB2Q5JXA9 342 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 PDPK2PQ6A1A2 396 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3GQ6DHY5 549 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3CQ6IPX1 549 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 RETSATQ6NUM9 610 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 PACS1Q6VY07 963 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TBC1D3Q8IZP1 549 aaPredicted RBP13.44□□□□□ -0.26
TMED3-205ENST00000558562 APCDD1Q8J025 514 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CNPY4Q8N129 248 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CACTIN-AS1Q8N1I8 211 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 STK40Q8N2I9 435 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 ALKBH8Q96BT7 664 aaKnown RBP13.44□□□□□ -0.26
TMED3-205ENST00000558562 WBP1Q96G27 269 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 FAM129BQ96TA1 746 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CPNE1Q99829 537 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CAAP1Q9H8G2 361 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 SSU72Q9NP77 194 aaKnown RBP13.44□□□□□ -0.26
TMED3-205ENST00000558562 IL1RAPL1Q9NZN1 696 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 TXNDC16Q9P2K2 825 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 CA5BQ9Y2D0 317 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
TMED3-205ENST00000558562 SLC28A2O43868 658 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 NDST3O95803 873 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 EPOP01588 193 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 MYF5P13349 255 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 KRT4P19013 534 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 GP5P40197 560 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 METAP1P53582 386 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 DAB2P98082 770 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 E2F1Q01094 437 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 BMPR2Q13873 1038 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 GALNT3Q14435 633 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 KIAA0930Q6ICG6 404 aaPredicted RBP13.43□□□□□ -0.26
TMED3-205ENST00000558562 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.43□□□□□ -0.26
TMED3-205ENST00000558562 SLC25A45Q8N413 288 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 OXR1Q8N573 874 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 ZNF557Q8N988 423 aaPredicted RBP13.43□□□□□ -0.26
TMED3-205ENST00000558562 MFSD2AQ8NA29 543 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 DYDC1Q8WWB3 177 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 KCNE4Q8WWG9 221 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 TTC9Q92623 222 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 ZNF578Q96N58 590 aaPredicted RBP13.43□□□□□ -0.26
TMED3-205ENST00000558562 COL12A1Q99715 3063 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 NOD2Q9HC29 1040 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 NSMCE4AQ9NXX6 385 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 SLCO3A1Q9UIG8 710 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 ERVW-1Q9UQF0 538 aa13.43□□□□□ -0.26
TMED3-205ENST00000558562 FCF1Q9Y324 198 aaKnown RBP13.43□□□□□ -0.26
TMED3-205ENST00000558562 PTPN13Q12923 2485 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 FFAR2O15552 330 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 WISP1O95388 367 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 IL1BP01584 269 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 CA4P22748 312 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 CCNFP41002 786 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 PLK1P53350 603 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 CSE1LP55060 971 aaKnown RBP13.42□□□□□ -0.26
TMED3-205ENST00000558562 UCNP55089 124 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 MPP2Q14168 576 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 POM121L1PQ3SYA9 428 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 PITRM1Q5JRX3 1037 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 RALGPS1Q5JS13 557 aa13.42□□□□□ -0.26
TMED3-205ENST00000558562 TSTD2Q5T7W7 516 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 199.4 ms