RNA–Protein interactions for RNA: ENST00000558455.1

TMOD3-203, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-203ENST00000558455 CASC3O15234 703 aaKnown RBP20.67■□□□□ 0.9
TMOD3-203ENST00000558455 SRP72O76094 671 aaKnown RBP20.67■□□□□ 0.9
TMOD3-203ENST00000558455 CDK14O94921 469 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 MAZP56270 477 aaKnown RBP20.67■□□□□ 0.9
TMOD3-203ENST00000558455 GNG11P61952 73 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 XIAPP98170 497 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 CDH17Q12864 832 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 PEX6Q13608 980 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 LDLRAP1Q5SW96 308 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 GPRC6AQ5T6X5 926 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 CDCP2Q5VXM1 449 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 C4orf22Q6V702 233 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 C17orf82Q86X59 251 aaPredicted RBP20.67■□□□□ 0.9
TMOD3-203ENST00000558455 NAGSQ8N159 534 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 DCBLD1Q8N8Z6 715 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 OR6C4Q8NGE1 309 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 ZNF398Q8TD17 642 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 ACTRT1Q8TDG2 376 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 PATE1Q8WXA2 126 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 MAGOHBQ96A72 148 aaKnown RBP20.67■□□□□ 0.9
TMOD3-203ENST00000558455 DNAJC1Q96KC8 554 aaKnown RBP20.67■□□□□ 0.9
TMOD3-203ENST00000558455 C19orf43Q9BQ61 176 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 APPL1Q9UKG1 709 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.67■□□□□ 0.9
TMOD3-203ENST00000558455 RNF215Q9Y6U7 377 aa20.67■□□□□ 0.9
TMOD3-203ENST00000558455 CES2O00748 559 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 ECEL1O95672 775 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 MT-CO3P00414 261 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 GLB1P16278 677 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 HADHAP40939 763 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 BASP1P80723 227 aaKnown RBP20.66■□□□□ 0.9
TMOD3-203ENST00000558455 TMEM115Q12893 351 aaPredicted RBP20.66■□□□□ 0.9
TMOD3-203ENST00000558455 TARDBPQ13148 414 aaKnown RBP eCLIP20.66■□□□□ 0.9
TMOD3-203ENST00000558455 NFATC2Q13469 925 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 CYP1B1Q16678 543 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 PLA2G4EQ3MJ16 856 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 LRRTM4Q86VH4 590 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 ZNF547Q8IVP9 402 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 ZCCHC2Q9C0B9 1178 aaKnown RBP20.66■□□□□ 0.9
TMOD3-203ENST00000558455 ASB8Q9H765 288 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 EIF2B3Q9NR50 452 aaKnown RBP20.66■□□□□ 0.9
TMOD3-203ENST00000558455 ZNF106Q9H2Y7 1883 aaKnown RBP20.66■□□□□ 0.9
TMOD3-203ENST00000558455 PLXNB3Q9ULL4 1909 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 ARHGEF17Q96PE2 2063 aaPredicted RBP20.66■□□□□ 0.9
TMOD3-203ENST00000558455 BPTFQ12830 3046 aa20.66■□□□□ 0.9
TMOD3-203ENST00000558455 IGF2RP11717 2491 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 RP1P56715 2156 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 NUDT21O43809 227 aaKnown RBP20.65■□□□□ 0.9
TMOD3-203ENST00000558455 EML2O95834 649 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 GAS8O95995 478 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 CAMK2BQ13554 666 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 GTF2H3Q13889 308 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 TRIP13Q15645 432 aaPredicted RBP20.65■□□□□ 0.9
TMOD3-203ENST00000558455 CCDC38Q502W7 563 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 MICALCLQ6ZW33 695 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 TRAPPC5Q8IUR0 188 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 CACTIN-AS1Q8N1I8 211 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 TTC25Q96NG3 672 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 SYNDIG1Q9H7V2 258 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 CASS4Q9NQ75 786 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 NLE1Q9NVX2 485 aaPredicted RBP20.65■□□□□ 0.9
TMOD3-203ENST00000558455 LRIT1Q9P2V4 623 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 TBC1D29Q9UFV1 150 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 SLC23A2Q9UGH3 650 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 KNTC1P50748 2209 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 MYLKQ15746 1914 aa20.65■□□□□ 0.9
TMOD3-203ENST00000558455 CCDC78A2IDD5 438 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 MROH6A6NGR9 719 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 KMOO15229 486 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 TCP1P17987 556 aaKnown RBP20.64■□□□□ 0.89
TMOD3-203ENST00000558455 AKT1P31749 480 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 COILP38432 576 aaPredicted RBP20.64■□□□□ 0.89
TMOD3-203ENST00000558455 INSCQ1MX18 579 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 ARL14Q8N4G2 192 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 RASGEF1AQ8N9B8 481 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 STYXQ8WUJ0 223 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 DEPDC7Q96QD5 511 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 KLC4Q9NSK0 619 aa20.64■□□□□ 0.89
TMOD3-203ENST00000558455 GOLGA6L10A0A0M3HER8 536 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 A6NCN8 305 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 AGAP14A8MT82 685 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 SNX2O60749 519 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 PNLIPP16233 465 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 ZNF7P17097 686 aaPredicted RBP20.63■□□□□ 0.89
TMOD3-203ENST00000558455 ITGALP20701 1170 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 MC4RP32245 332 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 VPS41P49754 854 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 CLCNKAP51800 687 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 CTSCP53634 463 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 CCDC137Q6PK04 289 aaKnown RBP20.63■□□□□ 0.89
TMOD3-203ENST00000558455 SNX20Q7Z614 316 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 SPRED1Q7Z699 444 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 CCNJLQ8IV13 435 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 Q8N9G6 341 aaPredicted RBP20.63■□□□□ 0.89
TMOD3-203ENST00000558455 WDR48Q8TAF3 677 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 TIMM29Q9BSF4 260 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 OSGEPL1Q9H4B0 414 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 FAM96AQ9H5X1 160 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 CRLS1Q9UJA2 301 aa20.63■□□□□ 0.89
TMOD3-203ENST00000558455 DNAJC16Q9Y2G8 782 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms