RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 HOXD1Q9GZZ0 328 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 C2orf40Q9H1Z8 148 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ATXN3LQ9H3M9 355 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 DPP3Q9NY33 737 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 DNMT3BQ9UBC3 853 aaKnown RBP5.04□□□□□ -1.6
HMG20A-204ENST00000558288 FZD10Q9ULW2 581 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 CARD8Q9Y2G2 431 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 PCDHGA11Q9Y5H2 935 aa5.04□□□□□ -1.6
HMG20A-204ENST00000558288 ZFC3H1O60293 1989 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 G3V2T6 193 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 H0Y626 953 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SLC22A1O15245 554 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 XPNPEP2O43895 674 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MAFO75444 373 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SOAT2O75908 522 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 TRIM16O95361 564 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MYL3P08590 195 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CLTBP09497 229 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 AKR1A1P14550 325 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 TCF3P15923 654 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 PTPN2P17706 415 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ALOX12P18054 663 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ERCC2P18074 760 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 NAT1P18440 290 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MAP2K4P45985 399 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ALDH7A1P49419 539 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CLCN3P51790 818 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 DNAJB13P59910 316 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CHRNB3Q05901 458 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 LAPTM5Q13571 262 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 STXBP2Q15833 593 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CTF1Q16619 201 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 LRIT3Q3SXY7 679 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 COLEC12Q5KU26 742 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CATSPEREQ5SY80 951 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 BTBD8Q5XKL5 378 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 C8orf82Q6P1X6 216 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SPESP1Q6UW49 350 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CXCL17Q6UXB2 119 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 LARP4Q71RC2 724 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 P2RY8Q86VZ1 359 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 LRRC49Q8IUZ0 686 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SPATA22Q8NHS9 363 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MCFD2Q8NI22 146 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ITFG1Q8TB96 612 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SLC35F5Q8WV83 523 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ELMO1Q92556 727 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 HDAC2Q92769 488 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 KIF12Q96FN5 646 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ZFYVE19Q96K21 471 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SPATA17Q96L03 361 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 NIFKQ9BYG3 293 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 DPEP3Q9H4B8 488 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MROH8Q9H579 483 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SCUBE2Q9NQ36 999 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 RNF19AQ9NV58 838 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SLC2A6Q9UGQ3 507 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 EVLQ9UI08 416 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SLCO3A1Q9UIG8 710 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MSRAQ9UJ68 235 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 USP3Q9Y6I4 520 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 A0A1W2PQ67 120 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CCDC154A6NI56 674 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 FXYD1O00168 92 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 TNFRSF10AO00220 468 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ACKR2O00590 384 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 UBFD1O14562 309 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 AXIN1O15169 862 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 GSTA4O15217 222 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 DYRK3O43781 588 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 LTA4HP09960 611 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CHRNB1P11230 501 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CYP2C18P33260 490 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CLK1P49759 484 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 GP2P55259 537 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 YWHAHQ04917 246 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 HIST2H2ACQ16777 129 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ADPRMQ3LIE5 342 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 FAM98BQ52LJ0 330 aaKnown RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ARHGAP17Q68EM7 881 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 GLYATQ6IB77 296 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SLC39A5Q6ZMH5 540 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ZDHHC17Q8IUH5 632 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 SLC22A9Q8IVM8 553 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MICU2Q8IYU8 434 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ABI1Q8IZP0 508 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 HS3ST5Q8IZT8 346 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 ELMOD1Q8N336 334 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MFSD4AQ8N468 514 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 CHDHQ8NE62 594 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-204ENST00000558288 OR6Q1Q8NGQ2 317 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 OR13J1Q8NGT2 312 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 FBXO30Q8TB52 745 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MCOLN3Q8TDD5 553 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 TWIST2Q8WVJ9 160 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 STON2Q8WXE9 905 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 MUL1Q969V5 352 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 FKBP10Q96AY3 582 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 KCNA7Q96RP8 456 aa5.03□□□□□ -1.6
HMG20A-204ENST00000558288 FICDQ9BVA6 458 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms