RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CSNK1G3Q9Y6M4 447 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 TMEM131Q92545 1883 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 ASCC3Q8N3C0 2202 aaKnown RBP14.18□□□□□ -0.14
USP3-205ENST00000557884 CABIN1Q9Y6J0 2220 aa14.18□□□□□ -0.14
USP3-205ENST00000557884 EFCAB8A8MWE9 144 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 H7C0S8 307 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 GRID2O43424 1007 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 NUAK1O60285 661 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 CDK14O94921 469 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 MLNP12872 115 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 MSH3P20585 1137 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 NMBRP28336 390 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 RPL21P46778 160 aaKnown RBP14.17□□□□□ -0.14
USP3-205ENST00000557884 ITGA8P53708 1063 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 SIM1P81133 766 aaPredicted RBP14.17□□□□□ -0.14
USP3-205ENST00000557884 CTBSQ01459 385 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 TMEM115Q12893 351 aaPredicted RBP14.17□□□□□ -0.14
USP3-205ENST00000557884 ILF3Q12906 894 aaKnown RBP eCLIP14.17□□□□□ -0.142e-6■■■■□ 21.5
USP3-205ENST00000557884 DNAJC3Q13217 504 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 GTF2H3Q13889 308 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 CCDC157Q569K6 752 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 PPM1JQ5JR12 505 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 DET1Q7L5Y6 550 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 CHST15Q7LFX5 561 aaPredicted RBP14.17□□□□□ -0.14
USP3-205ENST00000557884 NLRP9Q7RTR0 991 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 DGLUCYQ7Z3D6 616 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 MAATS1Q7Z4T9 603 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 PCGF5Q86SE9 256 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 SERPINA9Q86WD7 417 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 GKN2Q86XP6 184 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 NRROSQ86YC3 692 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 TRAPPC5Q8IUR0 188 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 PIANPQ8IYJ0 282 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 NXPE1Q8N323 547 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 PNPLA1Q8N8W4 532 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 FAM46DQ8NEK8 389 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 ULK4Q96C45 1275 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 CCDC97Q96F63 343 aaPredicted RBP14.17□□□□□ -0.14
USP3-205ENST00000557884 SNF8Q96H20 258 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 PWWP2AQ96N64 755 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 TTC25Q96NG3 672 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 CDC6Q99741 560 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 C19orf43Q9BQ61 176 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 DUSP23Q9BVJ7 150 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 GSDMCQ9BYG8 508 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 DPH5Q9H2P9 285 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 SMOXQ9NWM0 555 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 TRNAU1APQ9NX07 287 aaKnown RBP14.17□□□□□ -0.14
USP3-205ENST00000557884 RIMKLBQ9ULI2 386 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 GPR34Q9UPC5 381 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 ST14Q9Y5Y6 855 aa14.17□□□□□ -0.14
USP3-205ENST00000557884 FAM187AA6NFU0 413 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 SDR42E2A6NKP2 422 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 B4DGG1 531 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 VEGFDO43915 354 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 BANF1O75531 89 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 SEC31AO94979 1220 aaKnown RBP14.16□□□□□ -0.14
USP3-205ENST00000557884 GOT2P00505 430 aaKnown RBP14.16□□□□□ -0.14
USP3-205ENST00000557884 ACP5P13686 325 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 CEACAM1P13688 526 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 PSMA3P25788 255 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 ACTR1BP42025 376 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 CTSCP53634 463 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 ACTR1AP61163 376 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 PRAMEP78395 509 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 ACVR1Q04771 509 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 CACNG1Q06432 222 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 MORF4L2Q15014 288 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 PROX2Q3B8N5 592 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 AFTPHQ6ULP2 937 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 HOOK3Q86VS8 718 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 SFTPA2Q8IWL1 248 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 AGGF1Q8N302 714 aaeCLIP14.16□□□□□ -0.14
USP3-205ENST00000557884 RASGEF1AQ8N9B8 481 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 GPBAR1Q8TDU6 330 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 SCG3Q8WXD2 468 aaKnown RBP14.16□□□□□ -0.14
USP3-205ENST00000557884 MFSD3Q96ES6 412 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 DCUN1D1Q96GG9 259 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 APOLD1Q96LR9 279 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 ERP44Q9BS26 406 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 KIFC1Q9BW19 673 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 ZCCHC2Q9C0B9 1178 aaKnown RBP14.16□□□□□ -0.14
USP3-205ENST00000557884 RMI1Q9H9A7 625 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 SAMD15Q9P1V8 674 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 GULP1Q9UBP9 304 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 SOX13Q9UN79 622 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 KCNK6Q9Y257 313 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 MAD1L1Q9Y6D9 718 aa14.16□□□□□ -0.14
USP3-205ENST00000557884 OR2AG2A6NM03 316 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 TPP1O14773 563 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 TNFSF14O43557 240 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 ACRV1P26436 265 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 FOXN2P32314 431 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 MAGEA3P43357 314 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 DAB2P98082 770 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 B4GALNT1Q00973 533 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 DBN1Q16643 649 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 BBS9Q3SYG4 887 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 GPR33Q49SQ1 333 aa14.15□□□□□ -0.14
USP3-205ENST00000557884 MSS51Q4VC12 460 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms