RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 CHMP2BQ9UQN3 213 aa11.24□□□□□ -0.61
APEX1-220ENST00000557592 SLC17A4Q9Y2C5 497 aa11.24□□□□□ -0.61
APEX1-220ENST00000557592 RPS6KL1Q9Y6S9 549 aa11.24□□□□□ -0.61
APEX1-220ENST00000557592 ASCC3Q8N3C0 2202 aaKnown RBP11.24□□□□□ -0.61
APEX1-220ENST00000557592 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 YKT6O15498 198 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 VEGFDO43915 354 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 PIAS2O75928 621 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 CDK14O94921 469 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 VAPBO95292 243 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 FUCA1P04066 466 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 POLBP06746 335 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 IVLP07476 585 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 CTSEP14091 401 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 ZNF8P17098 575 aaPredicted RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 PGAM1P18669 254 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 EPHA8P29322 1005 aaPredicted RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 FOXN2P32314 431 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 ELK3P41970 407 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 GNPDA1P46926 289 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 BLKP51451 505 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 BNIP3Q12983 259 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 FASTKD1Q53R41 847 aaKnown RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 PRRT3Q5FWE3 981 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 STPG1Q5TH74 334 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 KIAA0930Q6ICG6 404 aaPredicted RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 PSAPL1Q6NUJ1 521 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 ZDHHC24Q6UX98 284 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 CENPUQ71F23 418 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 ADGRG6Q86SQ4 1221 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 CCDC25Q86WR0 208 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 IGDCC3Q8IVU1 814 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 PIANPQ8IYJ0 282 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 OTUD6BQ8N6M0 293 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 ZNF548Q8NEK5 533 aaPredicted RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 OR4L1Q8NH43 312 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 LMX1AQ8TE12 382 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 LRRC39Q96DD0 335 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 CFAP36Q96G28 342 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 DCUN1D1Q96GG9 259 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 TTC25Q96NG3 672 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 FCRL3Q96P31 734 aaPredicted RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 NAT9Q9BTE0 207 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 ZCCHC2Q9C0B9 1178 aaKnown RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 CATSPERZQ9NTU4 200 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 DNAAF2Q9NVR5 837 aaKnown RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 ATXN10Q9UBB4 475 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
APEX1-220ENST00000557592 ZNHIT2Q9UHR6 403 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 PRKAB1Q9Y478 270 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 GPSM3Q9Y4H4 160 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 DGKBQ9Y6T7 804 aa11.23□□□□□ -0.61
APEX1-220ENST00000557592 TRBV5-4A0A0C4DH59 114 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 AGAP14A8MT82 685 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 BHMG1C9JSJ3 638 aaPredicted RBP11.22□□□□□ -0.61
APEX1-220ENST00000557592 GOLGA8KD6RF30 607 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 GOLGA8TH3BQL2 631 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 CD3EAPO15446 510 aaKnown RBP11.22□□□□□ -0.61
APEX1-220ENST00000557592 DNAJC6O75061 913 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 USP1O94782 785 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 TTC4O95801 387 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 ZNF883P0CG24 379 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 RALBP11234 206 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 MSH3P20585 1137 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 DGKAP23743 735 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 ACRV1P26436 265 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 ARNTP27540 789 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 TMEM115Q12893 351 aaPredicted RBP11.22□□□□□ -0.61
APEX1-220ENST00000557592 C1orf61Q13536 156 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 GTF2H3Q13889 308 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 HLTFQ14527 1009 aaKnown RBP eCLIP11.22□□□□□ -0.61
APEX1-220ENST00000557592 CRYMQ14894 314 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 FASTKD3Q14CZ7 662 aaKnown RBP11.22□□□□□ -0.61
APEX1-220ENST00000557592 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 AARS2Q5JTZ9 985 aaKnown RBP11.22□□□□□ -0.61
APEX1-220ENST00000557592 CRTC3Q6UUV7 619 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 TMEM135Q86UB9 458 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 SERPINA9Q86WD7 417 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 GATAD2AQ86YP4 633 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 GALNT13Q8IUC8 556 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 CCNJLQ8IV13 435 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 ZBED8Q8IZ13 594 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
APEX1-220ENST00000557592 FBXO36Q8NEA4 188 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 SCARF2Q96GP6 870 aaPredicted RBP11.22□□□□□ -0.61
APEX1-220ENST00000557592 OR2M4Q96R27 311 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 TTC1Q99614 292 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 COPS8Q99627 209 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
APEX1-220ENST00000557592 LRRC61Q9BV99 259 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 SAYSD1Q9NPB0 183 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 ZDHHC18Q9NUE0 388 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 UCKL1Q9NWZ5 548 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 ZDHHC3Q9NYG2 299 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 IL1RAPL1Q9NZN1 696 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 SPASTQ9UBP0 616 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 TEX264Q9Y6I9 313 aa11.22□□□□□ -0.61
APEX1-220ENST00000557592 ZCWPW2A0A1B0GU75 182 aa11.21□□□□□ -0.61
APEX1-220ENST00000557592 OR2AG2A6NM03 316 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms