RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	SSR1	P43307	286 aa	Known RBP	11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	IFI35	P80217	286 aa	Predicted RBP	11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	BIRC2	Q13490	618 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	PEX6	Q13608	980 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	PDK2	Q15119	407 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	NFKBIB	Q15653	356 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	HADH	Q16836	314 aa	Known RBP	11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	KHDC1	Q4VXA5	237 aa	Known RBP	11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SNAP47	Q5SQN1	464 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	DCAF12	Q5T6F0	453 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	BORA	Q6PGQ7	559 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	ATG14	Q6ZNE5	492 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	LYSMD3	Q7Z3D4	306 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	FAM129C	Q86XR2	697 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	IL22RA1	Q8N6P7	574 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	OR10G6	Q8NH81	332 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	NCSTN	Q92542	709 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	SLC45A3	Q96JT2	553 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	RNF157	Q96PX1	679 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	PLEKHG4B	Q96PX9	1271 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	MLPH	Q9BV36	600 aa	Predicted RBP	11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	CEP41	Q9BYV8	373 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	PRDM8	Q9NQV8	689 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	FBXO8	Q9NRD0	319 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TTLL3	Q9Y4R7	772 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	TEX15	Q9BXT5	2789 aa		11.03	□□□□□ -0.64
HNRNPC-231	ENST00000557336	DOPEY2	Q9Y3R5	2298 aa		11.02	□□□□□ -0.64
HNRNPC-231	ENST00000557336	RGSL1	A5PLK6	1076 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CHUK	O15111	745 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ARHGAP6	O43182	974 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	GRID2	O43424	1007 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SNX2	O60749	519 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	DLGAP3	O95886	979 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SFTPC	P11686	197 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	F3	P13726	295 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	BRAF	P15056	766 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	F8A1	P23610	371 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CASP14	P31944	242 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ATP1A2	P50993	1020 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CLCNKA	P51800	687 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	GFER	P55789	205 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	POLE2	P56282	527 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	UBASH3A	P57075	661 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	RAB15	P59190	212 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	PPID	Q08752	370 aa	Known RBP	11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	GALNT3	Q14435	633 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	DESI1	Q6ICB0	168 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	LYPD8	Q6UX82	237 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TMC3	Q7Z5M5	1100 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ADGRG6	Q86SQ4	1221 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZNF547	Q8IVP9	402 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CCDC13	Q8IYE1	715 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	RNF31	Q96EP0	1072 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	IMP4	Q96G21	291 aa	Known RBP	11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	OLFM3	Q96PB7	478 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	OR2AG1	Q9H205	316 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CARD9	Q9H257	536 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	RMI1	Q9H9A7	625 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CTTNBP2NL	Q9P2B4	639 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CPNE7	Q9UBL6	633 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	DNPEP	Q9ULA0	475 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	LUC7L2	Q9Y383	392 aa	Known RBP	11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SPO11	Q9Y5K1	396 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SLC30A1	Q9Y6M5	507 aa		11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SPTAN1	Q13813	2472 aa	Known RBP	11.02	□□□□□ -0.65
HNRNPC-231	ENST00000557336	KIR2DS5	A0A0G2JLQ3	304 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336		A0A0G2JNG1	304 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	LILRA5	A6NI73	299 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	KIR2DS3	K7RE56	304 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	AURKA	O14965	403 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	PPFIA2	O75334	1257 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	STK17B	O94768	372 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	C9	P02748	559 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ZNF28	P17035	718 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	MX2	P20592	715 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	OAS2	P29728	719 aa	Known RBP	11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CA5A	P35218	305 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	EPHA4	P54764	986 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TLE1	Q04724	770 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	KCNAB2	Q13303	367 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	KIR2DS5	Q14953	304 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ATP1A1-AS1	Q5TC04	95 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SLC9A4	Q6AI14	798 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	NPNT	Q6UXI9	565 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	B4GALNT4	Q76KP1	1039 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	KDELC2	Q7Z4H8	507 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	C11orf96	Q7Z7L8	435 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	PTRH1	Q86Y79	214 aa	Known RBP	11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	NLGN4X	Q8N0W4	816 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CCNY	Q8ND76	341 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	CCDC112	Q8NEF3	446 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	SPATA22	Q8NHS9	363 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	AHCYL2	Q96HN2	611 aa	Known RBP	11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	HERPUD2	Q9BSE4	406 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	ADNP	Q9H2P0	1102 aa		11.01	□□□□□ -0.65
HNRNPC-231	ENST00000557336	TRIM39	Q9HCM9	518 aa		11.01	□□□□□ -0.65

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