RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PGRMC1O00264 195 aaKnown RBP22.58■■□□□ 1.21
TDP1-216ENST00000556867 CES2O00748 559 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 NUDT21O43809 227 aaKnown RBP22.58■■□□□ 1.21
TDP1-216ENST00000556867 ACP5P13686 325 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 PNLIPP16233 465 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 TPH1P17752 444 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 HADHAP40939 763 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 XIAPP98170 497 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 CDH17Q12864 832 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 TARDBPQ13148 414 aaKnown RBP eCLIP22.58■■□□□ 1.21
TDP1-216ENST00000556867 GSTA5Q7RTV2 222 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 NAGSQ8N159 534 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 OR52K1Q8NGK4 314 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 GDAP1Q8TB36 358 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 ZNF398Q8TD17 642 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 COG1Q8WTW3 980 aa22.58■■□□□ 1.21
TDP1-216ENST00000556867 ZCCHC2Q9C0B9 1178 aaKnown RBP22.58■■□□□ 1.21
TDP1-216ENST00000556867 EIF2B3Q9NR50 452 aaKnown RBP22.58■■□□□ 1.21
TDP1-216ENST00000556867 SRP72O76094 671 aaKnown RBP22.57■■□□□ 1.2
TDP1-216ENST00000556867 CDK14O94921 469 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 ECEL1O95672 775 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 PROS1P07225 676 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 CA5AP35218 305 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 LMAN1P49257 510 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 CLCNKAP51800 687 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 MAZP56270 477 aaKnown RBP22.57■■□□□ 1.2
TDP1-216ENST00000556867 TMEM115Q12893 351 aaPredicted RBP22.57■■□□□ 1.2
TDP1-216ENST00000556867 POU6F1Q14863 301 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 GPRC6AQ5T6X5 926 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 CRTC3Q6UUV7 619 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 LRRTM4Q86VH4 590 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 ACTRT1Q8TDG2 376 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 DEPDC7Q96QD5 511 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 PIH1D1Q9NWS0 290 aaKnown RBP22.57■■□□□ 1.2
TDP1-216ENST00000556867 KCNK6Q9Y257 313 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 RNF215Q9Y6U7 377 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 UNC13CQ8NB66 2214 aa22.57■■□□□ 1.2
TDP1-216ENST00000556867 TMEM8BA6NDV4 472 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 H7C0S8 307 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 NTN3O00634 580 aaPredicted RBP22.56■■□□□ 1.2
TDP1-216ENST00000556867 KMOO15229 486 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 TCEA3O75764 348 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 APRTP07741 180 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 PSMA3P25788 255 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 NFATC2Q13469 925 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 GTF2H3Q13889 308 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 SEPT6Q14141 434 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 CYP1B1Q16678 543 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 PPP1R21Q6ZMI0 780 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 ZNF438Q7Z4V0 828 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 ZNF547Q8IVP9 402 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 ARL14Q8N4G2 192 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 DNAAF3Q8N9W5 541 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 PATE1Q8WXA2 126 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 DNAJC1Q96KC8 554 aaKnown RBP22.56■■□□□ 1.2
TDP1-216ENST00000556867 TIMM29Q9BSF4 260 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 CASS4Q9NQ75 786 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 NLE1Q9NVX2 485 aaPredicted RBP22.56■■□□□ 1.2
TDP1-216ENST00000556867 LRIT1Q9P2V4 623 aa22.56■■□□□ 1.2
TDP1-216ENST00000556867 EPG5Q9HCE0 2579 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 ASPMQ8IZT6 3477 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 A6NCN8 305 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 MROH6A6NGR9 719 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 AGAP14A8MT82 685 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 GAS8O95995 478 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 TMPRSS15P98073 1019 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 NR1D2Q14995 579 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 TTC27Q6P3X3 843 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 RBM44Q6ZP01 1051 aaKnown RBP22.55■■□□□ 1.2
TDP1-216ENST00000556867 STYXQ8WUJ0 223 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 MAGOHBQ96A72 148 aaKnown RBP22.55■■□□□ 1.2
TDP1-216ENST00000556867 TTC25Q96NG3 672 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 AP1M1Q9BXS5 423 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 ASB8Q9H765 288 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 SMARCAL1Q9NZC9 954 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 TBC1D29Q9UFV1 150 aa22.55■■□□□ 1.2
TDP1-216ENST00000556867 TRABD2BA6NFA1 517 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 PRR19A6NJB7 356 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 EML2O95834 649 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 ZNF7P17097 686 aaPredicted RBP22.54■■□□□ 1.2
TDP1-216ENST00000556867 TCP1P17987 556 aaKnown RBP22.54■■□□□ 1.2
TDP1-216ENST00000556867 ITGALP20701 1170 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 GRIA1P42261 906 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 INSCQ1MX18 579 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 SNX20Q7Z614 316 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 SPRED1Q7Z699 444 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 C11orf96Q7Z7L8 435 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 TRAPPC5Q8IUR0 188 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 CCNJLQ8IV13 435 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 SFRP1Q8N474 314 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 RASGEF1AQ8N9B8 481 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 KDF1Q8NAX2 398 aaPredicted RBP22.54■■□□□ 1.2
TDP1-216ENST00000556867 ULK4Q96C45 1275 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 KLC4Q9NSK0 619 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 SLC23A2Q9UGH3 650 aa22.54■■□□□ 1.2
TDP1-216ENST00000556867 A0A1W2PQM1 296 aa22.53■■□□□ 1.2
TDP1-216ENST00000556867 CCL22O00626 93 aa22.53■■□□□ 1.2
TDP1-216ENST00000556867 CASC3O15234 703 aaKnown RBP22.53■■□□□ 1.2
TDP1-216ENST00000556867 CSO75390 466 aaKnown RBP22.53■■□□□ 1.2
TDP1-216ENST00000556867 RPLP0P05388 317 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms